RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 CCND3P30281 292 aaPredicted RBP3.47□□□□□ -1.85
UBR1-205ENST00000564540 IGLV3-21P80748 117 aaPredicted RBP3.47□□□□□ -1.85
UBR1-205ENST00000564540 CRMP1Q14194 572 aa3.47□□□□□ -1.85
UBR1-205ENST00000564540 CASC4Q6P4E1 433 aa3.47□□□□□ -1.85
UBR1-205ENST00000564540 PODNL1Q6PEZ8 512 aa3.47□□□□□ -1.85
UBR1-205ENST00000564540 SHQ1Q6PI26 577 aaKnown RBP3.47□□□□□ -1.85
UBR1-205ENST00000564540 METTL23Q86XA0 190 aa3.47□□□□□ -1.85
UBR1-205ENST00000564540 CDHR1Q96JP9 859 aa3.47□□□□□ -1.85
UBR1-205ENST00000564540 NT5DC2Q9H857 520 aa3.47□□□□□ -1.85
UBR1-205ENST00000564540 GPR173Q9NS66 373 aa3.47□□□□□ -1.85
UBR1-205ENST00000564540 FAM212BQ9NTI7 297 aaPredicted RBP3.47□□□□□ -1.85
UBR1-205ENST00000564540 Q9UF83 564 aa3.47□□□□□ -1.85
UBR1-205ENST00000564540 RSPH14Q9UHP6 348 aa3.47□□□□□ -1.85
UBR1-205ENST00000564540 M0R296 226 aa3.46□□□□□ -1.86
UBR1-205ENST00000564540 CSO75390 466 aaKnown RBP3.46□□□□□ -1.86
UBR1-205ENST00000564540 LETM1O95202 739 aaPredicted RBP3.46□□□□□ -1.86
UBR1-205ENST00000564540 ODC1P11926 461 aa3.46□□□□□ -1.86
UBR1-205ENST00000564540 PPP2R1AP30153 589 aa3.46□□□□□ -1.86
UBR1-205ENST00000564540 HMGCLP35914 325 aa3.46□□□□□ -1.86
UBR1-205ENST00000564540 ALDH3B1P43353 468 aa3.46□□□□□ -1.86
UBR1-205ENST00000564540 IER3P46695 156 aa3.46□□□□□ -1.86
UBR1-205ENST00000564540 BRCC3P46736 316 aa3.46□□□□□ -1.86
UBR1-205ENST00000564540 HMGCS2P54868 508 aa3.46□□□□□ -1.86
UBR1-205ENST00000564540 ABRAXAS2Q15018 415 aa3.46□□□□□ -1.86
UBR1-205ENST00000564540 C17orf58Q2M2W7 97 aa3.46□□□□□ -1.86
UBR1-205ENST00000564540 MPP7Q5T2T1 576 aa3.46□□□□□ -1.86
UBR1-205ENST00000564540 OLFML2AQ68BL7 652 aa3.46□□□□□ -1.86
UBR1-205ENST00000564540 PAMR1Q6UXH9 720 aa3.46□□□□□ -1.86
UBR1-205ENST00000564540 SAMD12Q8N8I0 201 aa3.46□□□□□ -1.86
UBR1-205ENST00000564540 CKAP2Q8WWK9 683 aa3.46□□□□□ -1.86
UBR1-205ENST00000564540 CORO2AQ92828 525 aa3.46□□□□□ -1.86
UBR1-205ENST00000564540 ERO1AQ96HE7 468 aa3.46□□□□□ -1.86
UBR1-205ENST00000564540 CYYR1Q96J86 154 aa3.46□□□□□ -1.86
UBR1-205ENST00000564540 RASL10BQ96S79 203 aa3.46□□□□□ -1.86
UBR1-205ENST00000564540 C17orf62Q9BQA9 187 aa3.46□□□□□ -1.86
UBR1-205ENST00000564540 SLCO1C1Q9NYB5 712 aa3.46□□□□□ -1.86
UBR1-205ENST00000564540 GTPBP10A4D1E9 387 aaKnown RBP3.45□□□□□ -1.86
UBR1-205ENST00000564540 ZNF487B1APH4 448 aa3.45□□□□□ -1.86
UBR1-205ENST00000564540 H0YIG0 161 aa3.45□□□□□ -1.86
UBR1-205ENST00000564540 DUSP11O75319 330 aaKnown RBP3.45□□□□□ -1.86
UBR1-205ENST00000564540 RHBDL1O75783 438 aa3.45□□□□□ -1.86
UBR1-205ENST00000564540 IFNAR1P17181 557 aa3.45□□□□□ -1.86
UBR1-205ENST00000564540 FASP25445 335 aa3.45□□□□□ -1.86
UBR1-205ENST00000564540 SOAT1P35610 550 aa3.45□□□□□ -1.86
UBR1-205ENST00000564540 AKAP17AQ02040 695 aaKnown RBP3.45□□□□□ -1.86
UBR1-205ENST00000564540 SLC17A1Q14916 467 aa3.45□□□□□ -1.86
UBR1-205ENST00000564540 PSMD6Q15008 389 aa3.45□□□□□ -1.86
UBR1-205ENST00000564540 RSBN1Q5VWQ0 802 aaPredicted RBP3.45□□□□□ -1.86
UBR1-205ENST00000564540 ZNF600Q6ZNG1 722 aa3.45□□□□□ -1.86
UBR1-205ENST00000564540 FAM47EQ6ZV65 393 aa3.45□□□□□ -1.86
UBR1-205ENST00000564540 KLHL7Q8IXQ5 586 aa3.45□□□□□ -1.86
UBR1-205ENST00000564540 ZNF491Q8N8L2 437 aa3.45□□□□□ -1.86
UBR1-205ENST00000564540 NTNG2Q96CW9 530 aa3.45□□□□□ -1.86
UBR1-205ENST00000564540 PPP1R16AQ96I34 528 aa3.45□□□□□ -1.86
UBR1-205ENST00000564540 IDI2Q9BXS1 227 aa3.45□□□□□ -1.86
UBR1-205ENST00000564540 TEX13BQ9BXU2 312 aa3.45□□□□□ -1.86
UBR1-205ENST00000564540 ZBP1Q9H171 429 aa3.45□□□□□ -1.86
UBR1-205ENST00000564540 ANAPC11Q9NYG5 84 aa3.45□□□□□ -1.86
UBR1-205ENST00000564540 NYAP2Q9P242 653 aa3.45□□□□□ -1.86
UBR1-205ENST00000564540 RCOR3Q9P2K3 495 aaPredicted RBP3.45□□□□□ -1.86
UBR1-205ENST00000564540 ZSCAN5CA6NGD5 496 aaPredicted RBP3.44□□□□□ -1.86
UBR1-205ENST00000564540 OR6A2O95222 327 aa3.44□□□□□ -1.86
UBR1-205ENST00000564540 CCDC159P0C7I6 412 aa3.44□□□□□ -1.86
UBR1-205ENST00000564540 EZRP15311 586 aaKnown RBP3.44□□□□□ -1.86
UBR1-205ENST00000564540 OR1D2P34982 312 aa3.44□□□□□ -1.86
UBR1-205ENST00000564540 RPL27P61353 136 aaKnown RBP3.44□□□□□ -1.86
UBR1-205ENST00000564540 LCP2Q13094 533 aa3.44□□□□□ -1.86
UBR1-205ENST00000564540 ZNF79Q15937 498 aa3.44□□□□□ -1.86
UBR1-205ENST00000564540 IQCCQ4KMZ1 466 aa3.44□□□□□ -1.86
UBR1-205ENST00000564540 LIPJQ5W064 366 aa3.44□□□□□ -1.86
UBR1-205ENST00000564540 ALKBH5Q6P6C2 394 aaKnown RBP3.44□□□□□ -1.86
UBR1-205ENST00000564540 DCLRE1AQ6PJP8 1040 aa3.44□□□□□ -1.86
UBR1-205ENST00000564540 GLRX5Q86SX6 157 aa3.44□□□□□ -1.86
UBR1-205ENST00000564540 AQP12AQ8IXF9 295 aa3.44□□□□□ -1.86
UBR1-205ENST00000564540 SIX6OS1Q8N1H7 587 aa3.44□□□□□ -1.86
UBR1-205ENST00000564540 NHLRC2Q8NBF2 726 aa3.44□□□□□ -1.86
UBR1-205ENST00000564540 B3GALT6Q96L58 329 aa3.44□□□□□ -1.86
UBR1-205ENST00000564540 CUEDC2Q9H467 287 aa3.44□□□□□ -1.86
UBR1-205ENST00000564540 IKZF3Q9UKT9 509 aa3.44□□□□□ -1.86
UBR1-205ENST00000564540 SLC30A4O14863 429 aa3.43□□□□□ -1.86
UBR1-205ENST00000564540 MCF2LO15068 1137 aa3.43□□□□□ -1.86
UBR1-205ENST00000564540 TSC22D2O75157 780 aa3.43□□□□□ -1.86
UBR1-205ENST00000564540 NME6O75414 186 aaPredicted RBP3.43□□□□□ -1.86
UBR1-205ENST00000564540 FOSL2P15408 326 aa3.43□□□□□ -1.86
UBR1-205ENST00000564540 DRD3P35462 400 aa3.43□□□□□ -1.86
UBR1-205ENST00000564540 TSPY1Q01534 308 aa3.43□□□□□ -1.86
UBR1-205ENST00000564540 SLC3A1Q07837 685 aa3.43□□□□□ -1.86
UBR1-205ENST00000564540 CAPN13Q6MZZ7 669 aaPredicted RBP3.43□□□□□ -1.86
UBR1-205ENST00000564540 CGB2Q6NT52 195 aa3.43□□□□□ -1.86
UBR1-205ENST00000564540 SLC22A18ASQ8N1D0 253 aa3.43□□□□□ -1.86
UBR1-205ENST00000564540 PARP8Q8N3A8 854 aa3.43□□□□□ -1.86
UBR1-205ENST00000564540 PCED1BQ96HM7 432 aa3.43□□□□□ -1.86
UBR1-205ENST00000564540 PARK7Q99497 189 aaKnown RBP3.43□□□□□ -1.86
UBR1-205ENST00000564540 ZNF559Q9BR84 538 aa3.43□□□□□ -1.86
UBR1-205ENST00000564540 EDEM3Q9BZQ6 932 aa3.43□□□□□ -1.86
UBR1-205ENST00000564540 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.43□□□□□ -1.86
UBR1-205ENST00000564540 CLIP2Q9UDT6 1046 aa3.43□□□□□ -1.86
UBR1-205ENST00000564540 NRBP1Q9UHY1 535 aa3.43□□□□□ -1.86
UBR1-205ENST00000564540 EXOC6BQ9Y2D4 811 aa3.43□□□□□ -1.86
UBR1-205ENST00000564540 OR1A2Q9Y585 309 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms