RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 OR5T3Q8NGG3 340 aa12.1□□□□□ -0.47
CLK3-214ENST00000564096 TANKQ92844 425 aa12.1□□□□□ -0.47
CLK3-214ENST00000564096 TBC1D20Q96BZ9 403 aa12.1□□□□□ -0.47
CLK3-214ENST00000564096 COQ8BQ96D53 544 aa12.1□□□□□ -0.47
CLK3-214ENST00000564096 TAAR9Q96RI9 348 aa12.1□□□□□ -0.47
CLK3-214ENST00000564096 CSF3RQ99062 836 aa12.1□□□□□ -0.47
CLK3-214ENST00000564096 CTRCQ99895 268 aa12.1□□□□□ -0.47
CLK3-214ENST00000564096 ULBP3Q9BZM4 244 aa12.1□□□□□ -0.47
CLK3-214ENST00000564096 LRMDAQ9H2I8 198 aa12.1□□□□□ -0.47
CLK3-214ENST00000564096 MKKSQ9NPJ1 570 aaPredicted RBP12.1□□□□□ -0.47
CLK3-214ENST00000564096 C14orf105Q9NVL8 296 aa12.1□□□□□ -0.47
CLK3-214ENST00000564096 TAS2R7Q9NYW3 318 aa12.1□□□□□ -0.47
CLK3-214ENST00000564096 PISDQ9UG56 409 aa12.1□□□□□ -0.47
CLK3-214ENST00000564096 BTNL2Q9UIR0 455 aa12.1□□□□□ -0.47
CLK3-214ENST00000564096 PRSS51A0A1B0GVH4 220 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 GABRR3A8MPY1 467 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 B2RBV5 119 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 RFXANKO14593 260 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 NVLO15381 856 aaKnown RBP12.09□□□□□ -0.47
CLK3-214ENST00000564096 GYG2O15488 501 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 ERN1O75460 977 aaKnown RBP12.09□□□□□ -0.47
CLK3-214ENST00000564096 ERAL1O75616 437 aaKnown RBP12.09□□□□□ -0.47
CLK3-214ENST00000564096 MED26O95402 600 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 FHP07954 510 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 LAMP1P11279 417 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 CCL4P13236 92 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 PTPN4P29074 926 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 XCR1P46094 333 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 HNRNPFP52597 415 aaKnown RBP12.09□□□□□ -0.47
CLK3-214ENST00000564096 MAPK10P53779 464 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 DCDP81605 110 aaKnown RBP12.09□□□□□ -0.47
CLK3-214ENST00000564096 C6orf163Q5TEZ5 329 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 C1orf189Q5VU69 101 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 C18orf63Q68DL7 685 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 SLC2A7Q6PXP3 512 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 RIPOR1Q6ZS17 1223 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 SLCO6A1Q86UG4 719 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 ARHGAP24Q8N264 748 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 OR51Q1Q8NH59 317 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 FKBP10Q96AY3 582 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 PEX11GQ96HA9 241 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 LRFN5Q96NI6 719 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 CCDC115Q96NT0 180 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 GBP5Q96PP8 586 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 PANX1Q96RD7 426 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 BBS4Q96RK4 519 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 NPAS2Q99743 824 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 YIPF2Q9BWQ6 316 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 RBCK1Q9BYM8 510 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 C1orf21Q9H246 121 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 APMAPQ9HDC9 416 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 SLC35C2Q9NQQ7 365 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 ACSS1Q9NUB1 689 aaPredicted RBP12.09□□□□□ -0.47
CLK3-214ENST00000564096 KCMF1Q9P0J7 381 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 TRPC4Q9UBN4 977 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 ZNF282Q9UDV7 671 aaPredicted RBP12.09□□□□□ -0.47
CLK3-214ENST00000564096 MAN2B2Q9Y2E5 1009 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 MMACHCQ9Y4U1 282 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 MAU2Q9Y6X3 613 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 ASXL3Q9C0F0 2248 aa12.09□□□□□ -0.47
CLK3-214ENST00000564096 DMDP11532 3685 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 MDC1Q14676 2089 aaKnown RBP12.08□□□□□ -0.48
CLK3-214ENST00000564096 A0A096LPI6 279 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 A0A1W2PRB8 838 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 GLOD5A6NK44 160 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 C9J4A7 227 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 CYR61O00622 381 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 FBP2O00757 339 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 PRKRAO75569 313 aaKnown RBP12.08□□□□□ -0.48
CLK3-214ENST00000564096 SLITRK5O94991 958 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 BMP10O95393 424 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 TIAF1O95411 115 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 KLK3P07288 261 aaPredicted RBP12.08□□□□□ -0.48
CLK3-214ENST00000564096 T-ENOLP0DO92 83 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 CSNK2A2P19784 350 aaPredicted RBP12.08□□□□□ -0.48
CLK3-214ENST00000564096 OR1D4P47884 311 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 TRPC1P48995 793 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 NCBP2P52298 156 aaKnown RBP eCLIP12.08□□□□□ -0.48
CLK3-214ENST00000564096 HSD17B7P56937 341 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 NCALDP61601 193 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 SNRPNP63162 240 aaKnown RBP12.08□□□□□ -0.48
CLK3-214ENST00000564096 MAT1AQ00266 395 aaKnown RBP12.08□□□□□ -0.48
CLK3-214ENST00000564096 PLIN5Q00G26 463 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 OCA2Q04671 838 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 SLC13A2Q13183 592 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 NKAIN1Q4KMZ8 207 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 ZNF385BQ569K4 471 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 C3orf38Q5JPI3 329 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 PRAMEF17Q5VTA0 474 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 DNAJC14Q6Y2X3 702 aaPredicted RBP12.08□□□□□ -0.48
CLK3-214ENST00000564096 PGAM4Q8N0Y7 254 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 MMP21Q8N119 569 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 LRRC25Q8N386 305 aaPredicted RBP12.08□□□□□ -0.48
CLK3-214ENST00000564096 RBM15BQ8NDT2 890 aaKnown RBP12.08□□□□□ -0.48
CLK3-214ENST00000564096 OR4K14Q8NGD5 310 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 OR4A15Q8NGL6 344 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 MCUR1Q96AQ8 359 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 PELOQ9BRX2 385 aaKnown RBP12.08□□□□□ -0.48
CLK3-214ENST00000564096 SPAG4Q9NPE6 437 aa12.08□□□□□ -0.48
CLK3-214ENST00000564096 SLC52A3Q9NQ40 469 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms