RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 PGRMC2O15173 223 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 SLC16A6O15403 523 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 PRAMEF10O60809 474 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 HLCSP50747 726 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 ARHGDIAP52565 204 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 YPEL5P62699 121 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 SLC9A5Q14940 896 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 ZNF750Q32MQ0 723 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 SPDYE7PQ495Y7 208 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 IFI44LQ53G44 452 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 ZNF542PQ5EBM4 170 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 TJAP1Q5JTD0 557 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 ZNF691Q5VV52 312 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 MRM1Q6IN84 353 aaKnown RBP18.12■□□□□ 0.49
SMPD3-203ENST00000563226 VN1R4Q7Z5H5 301 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 ADAMTS16Q8TE57 1224 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 KCNC2Q96PR1 638 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 NPLQ9BXD5 320 aaPredicted RBP18.12■□□□□ 0.49
SMPD3-203ENST00000563226 YTHDF1Q9BYJ9 559 aaKnown RBP18.12■□□□□ 0.49
SMPD3-203ENST00000563226 RUBCNLQ9H714 662 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 TAS2R7Q9NYW3 318 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 FBXW2Q9UKT8 454 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 RAB23Q9ULC3 237 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 SNX7Q9UNH6 387 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 ANGPT4Q9Y264 503 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 ZNF451Q9Y4E5 1061 aa18.12■□□□□ 0.49
SMPD3-203ENST00000563226 MAN2B1O00754 1011 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 C9P02748 559 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 BCHEP06276 602 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 CELA2BP08218 269 aaPredicted RBP18.11■□□□□ 0.49
SMPD3-203ENST00000563226 ITGAMP11215 1152 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 DRD2P14416 443 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 CDH2P19022 906 aaPredicted RBP18.11■□□□□ 0.49
SMPD3-203ENST00000563226 AGXTP21549 392 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 ISL1P61371 349 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 DUSP2Q05923 314 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 RAPSNQ13702 412 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 COL9A2Q14055 689 aaPredicted RBP18.11■□□□□ 0.49
SMPD3-203ENST00000563226 RFX4Q33E94 735 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 ZC3H12BQ5HYM0 836 aaKnown RBP18.11■□□□□ 0.49
SMPD3-203ENST00000563226 C18orf63Q68DL7 685 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 SLC44A2Q8IWA5 706 aaPredicted RBP18.11■□□□□ 0.49
SMPD3-203ENST00000563226 SLC38A5Q8WUX1 472 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 NRBF2Q96F24 287 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 TOE1Q96GM8 510 aaKnown RBP18.11■□□□□ 0.49
SMPD3-203ENST00000563226 AMDHD1Q96NU7 426 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 RSPO3Q9BXY4 272 aaPredicted RBP18.11■□□□□ 0.49
SMPD3-203ENST00000563226 SLC24A3Q9HC58 644 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 SLC35C2Q9NQQ7 365 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 ACSS1Q9NUB1 689 aaPredicted RBP18.11■□□□□ 0.49
SMPD3-203ENST00000563226 TRNAU1APQ9NX07 287 aaKnown RBP18.11■□□□□ 0.49
SMPD3-203ENST00000563226 BCKDKO14874 412 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 DPM1O60762 260 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 AIFM1O95831 613 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 RECKO95980 971 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 ALPPL2P10696 532 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 GLULP15104 373 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 FUT4P22083 530 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 GSTM2P28161 218 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 EPHA2P29317 976 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 CLK3P49761 638 aaKnown RBP18.11■□□□□ 0.49
SMPD3-203ENST00000563226 TP53BP2Q13625 1128 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 SIM2Q14190 667 aaPredicted RBP18.11■□□□□ 0.49
SMPD3-203ENST00000563226 GPR18Q14330 331 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 MAPK11Q15759 364 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 CHRDL2Q6WN34 429 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 ABI3BPQ7Z7G0 1075 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 KCT2Q8NC54 265 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 PSMA8Q8TAA3 256 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 OR2A14Q96R47 310 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 EPYCQ99645 322 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 ADNPQ9H2P0 1102 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 PAPOLBQ9NRJ5 636 aaKnown RBP18.11■□□□□ 0.49
SMPD3-203ENST00000563226 HS3ST3A1Q9Y663 406 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 SLCO1B1Q9Y6L6 691 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 COMMD3-BMI1R4GMX3 469 aa18.11■□□□□ 0.49
SMPD3-203ENST00000563226 J3KTA2 159 aa18.1■□□□□ 0.49
SMPD3-203ENST00000563226 ZW10O43264 779 aa18.1■□□□□ 0.49
SMPD3-203ENST00000563226 AHCYL1O43865 530 aa18.1■□□□□ 0.49
SMPD3-203ENST00000563226 MAGP20916 626 aa18.1■□□□□ 0.49
SMPD3-203ENST00000563226 CCT3P49368 545 aaKnown RBP18.1■□□□□ 0.49
SMPD3-203ENST00000563226 ELOAQ14241 798 aaKnown RBP18.1■□□□□ 0.49
SMPD3-203ENST00000563226 C6orf141Q5SZD1 244 aa18.1■□□□□ 0.49
SMPD3-203ENST00000563226 TBC1D19Q8N5T2 526 aa18.1■□□□□ 0.49
SMPD3-203ENST00000563226 OR10G6Q8NH81 332 aa18.1■□□□□ 0.49
SMPD3-203ENST00000563226 TMEM19Q96HH6 336 aa18.1■□□□□ 0.49
SMPD3-203ENST00000563226 FAIM2Q9BWQ8 316 aa18.1■□□□□ 0.49
SMPD3-203ENST00000563226 LYVE1Q9Y5Y7 322 aa18.1■□□□□ 0.49
SMPD3-203ENST00000563226 TDRD6O60522 2096 aaKnown RBP18.1■□□□□ 0.49
SMPD3-203ENST00000563226 NINQ8N4C6 2090 aa18.1■□□□□ 0.49
SMPD3-203ENST00000563226 HMGN4O00479 90 aa18.1■□□□□ 0.49
SMPD3-203ENST00000563226 KIF1CO43896 1103 aaKnown RBP18.1■□□□□ 0.49
SMPD3-203ENST00000563226 ERAL1O75616 437 aaKnown RBP18.1■□□□□ 0.49
SMPD3-203ENST00000563226 DDX5P17844 614 aaKnown RBP18.1■□□□□ 0.49
SMPD3-203ENST00000563226 POLR2CP19387 275 aaPredicted RBP18.1■□□□□ 0.49
SMPD3-203ENST00000563226 POU3F3P20264 500 aaPredicted RBP18.1■□□□□ 0.49
SMPD3-203ENST00000563226 CRHBPP24387 322 aa18.1■□□□□ 0.49
SMPD3-203ENST00000563226 NCBP2P52298 156 aaKnown RBP eCLIP18.1■□□□□ 0.49
SMPD3-203ENST00000563226 MLC1Q15049 377 aa18.1■□□□□ 0.49
SMPD3-203ENST00000563226 KIAA0895LQ68EN5 471 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms