RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 UBE2TQ9NPD8 197 aaPredicted RBP4.57□□□□□ -1.68
LINC00557-201ENST00000563184 PRMT8Q9NR22 394 aaPredicted RBP4.57□□□□□ -1.68
LINC00557-201ENST00000563184 DHX29Q7Z478 1369 aaKnown RBP4.56□□□□□ -1.68
LINC00557-201ENST00000563184 IGLV4-3A0A075B6K6 122 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 TRBV5-4A0A0C4DH59 114 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 A0A1W2PPR1 153 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 TLR4O00206 839 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 SLC28A1O00337 649 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 PI15O43692 258 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 CSO75390 466 aaKnown RBP4.56□□□□□ -1.68
LINC00557-201ENST00000563184 CXCL14O95715 111 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 BAG2O95816 211 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 CT45A8P0DMV1 189 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 CT45A9P0DMV2 189 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 HLA-DPA1P20036 260 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 ETV5P41161 510 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 ZFP36L2P47974 494 aaKnown RBP4.56□□□□□ -1.68
LINC00557-201ENST00000563184 NDUFV3P56181 108 aaKnown RBP4.56□□□□□ -1.68
LINC00557-201ENST00000563184 KCNK10P57789 538 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 ARF5P84085 180 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 PAX8Q06710 450 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 ENPP2Q13822 863 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 CT45A2Q5DJT8 189 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 LCE1FQ5T754 118 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 METTL7BQ6UX53 244 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 ZNF730Q6ZMV8 503 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 MCM10Q7L590 875 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 OR4L1Q8NH43 312 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 SPATA13Q96N96 652 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 ATOH8Q96SQ7 321 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 CCDC28BQ9BUN5 200 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 WDR41Q9HAD4 459 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 GPN1Q9HCN4 374 aaPredicted RBP4.56□□□□□ -1.68
LINC00557-201ENST00000563184 DDX28Q9NUL7 540 aaKnown RBP4.56□□□□□ -1.68
LINC00557-201ENST00000563184 PAK5Q9P286 719 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 CTSZQ9UBR2 303 aa4.56□□□□□ -1.68
LINC00557-201ENST00000563184 ZNF724A8MTY0 619 aa4.55□□□□□ -1.68
LINC00557-201ENST00000563184 OR6B1O95007 311 aa4.55□□□□□ -1.68
LINC00557-201ENST00000563184 OR6A2O95222 327 aa4.55□□□□□ -1.68
LINC00557-201ENST00000563184 FHP07954 510 aa4.55□□□□□ -1.68
LINC00557-201ENST00000563184 ABHD2P08910 425 aa4.55□□□□□ -1.68
LINC00557-201ENST00000563184 PCP11498 1178 aaKnown RBP4.55□□□□□ -1.68
LINC00557-201ENST00000563184 P4HA1P13674 534 aa4.55□□□□□ -1.68
LINC00557-201ENST00000563184 ZNF10P21506 573 aaPredicted RBP4.55□□□□□ -1.68
LINC00557-201ENST00000563184 RPL27P61353 136 aaKnown RBP4.55□□□□□ -1.68
LINC00557-201ENST00000563184 RPS27AP62979 156 aaKnown RBP4.55□□□□□ -1.68
LINC00557-201ENST00000563184 CD300CQ08708 224 aa4.55□□□□□ -1.68
LINC00557-201ENST00000563184 HSPA14Q0VDF9 509 aa4.55□□□□□ -1.68
LINC00557-201ENST00000563184 CBX3Q13185 183 aa4.55□□□□□ -1.68
LINC00557-201ENST00000563184 PAQR6Q6TCH4 344 aa4.55□□□□□ -1.68
LINC00557-201ENST00000563184 GPRIN3Q6ZVF9 776 aa4.55□□□□□ -1.68
LINC00557-201ENST00000563184 ITIH5Q86UX2 942 aa4.55□□□□□ -1.68
LINC00557-201ENST00000563184 RTL3Q8N8U3 475 aaKnown RBP4.55□□□□□ -1.68
LINC00557-201ENST00000563184 ZNF485Q8NCK3 441 aa4.55□□□□□ -1.68
LINC00557-201ENST00000563184 ATP6V0A1Q93050 837 aa4.55□□□□□ -1.68
LINC00557-201ENST00000563184 DTD2Q96FN9 168 aa4.55□□□□□ -1.68
LINC00557-201ENST00000563184 CXorf58Q96LI9 332 aa4.55□□□□□ -1.68
LINC00557-201ENST00000563184 TNFRSF13CQ96RJ3 184 aa4.55□□□□□ -1.68
LINC00557-201ENST00000563184 FAM213AQ9BRX8 229 aa4.55□□□□□ -1.68
LINC00557-201ENST00000563184 TMEM245Q9H330 911 aa4.55□□□□□ -1.68
LINC00557-201ENST00000563184 DCLRE1BQ9H816 532 aa4.55□□□□□ -1.68
LINC00557-201ENST00000563184 TEKT2Q9UIF3 430 aa4.55□□□□□ -1.68
LINC00557-201ENST00000563184 TRMT6Q9UJA5 497 aaKnown RBP4.55□□□□□ -1.68
LINC00557-201ENST00000563184 NIP7Q9Y221 180 aaKnown RBP eCLIP4.55□□□□□ -1.68
LINC00557-201ENST00000563184 A8MXK9 166 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 OGTO15294 1046 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 GMNNO75496 209 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 TXNDC12O95881 172 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 ADORA3P0DMS8 318 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 ATP4BP51164 291 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 PRELPP51888 382 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 PEX3P56589 373 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 HERV-K104P63124 156 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 DCAF12Q5T6F0 453 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 TBC1D10CQ8IV04 446 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 PEX5LQ8IYB4 626 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 MRPL24Q96A35 216 aaKnown RBP4.54□□□□□ -1.68
LINC00557-201ENST00000563184 SLCO4A1Q96BD0 722 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 RCHY1Q96PM5 261 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 TAAR6Q96RI8 345 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 EGLN1Q9GZT9 426 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 CARD9Q9H257 536 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 TUBB1Q9H4B7 451 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 MARCH7Q9H992 704 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 NMUR1Q9HB89 426 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 PIGVQ9NUD9 493 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 ACOXLQ9NUZ1 547 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 AKAP7Q9P0M2 348 aaPredicted RBP4.54□□□□□ -1.68
LINC00557-201ENST00000563184 HMG20BQ9P0W2 317 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 KLK13Q9UKR3 277 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 TDRKHQ9Y2W6 561 aaKnown RBP4.54□□□□□ -1.68
LINC00557-201ENST00000563184 KNSTRNQ9Y448 316 aa4.54□□□□□ -1.68
LINC00557-201ENST00000563184 GON4LQ3T8J9 2241 aa4.53□□□□□ -1.68
LINC00557-201ENST00000563184 LOC390937A0A1W2PQ73 354 aa4.53□□□□□ -1.68
LINC00557-201ENST00000563184 FBP2O00757 339 aa4.53□□□□□ -1.68
LINC00557-201ENST00000563184 KIAA0513O60268 411 aa4.53□□□□□ -1.68
LINC00557-201ENST00000563184 POP4O95707 220 aaKnown RBP4.53□□□□□ -1.68
LINC00557-201ENST00000563184 MT-ND3P03897 115 aa4.53□□□□□ -1.68
LINC00557-201ENST00000563184 TPBGLP0DKB5 382 aa4.53□□□□□ -1.68
LINC00557-201ENST00000563184 FERP16591 822 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms