RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 OGDHLQ9ULD0 1010 aa12.47□□□□□ -0.41
USB1-207ENST00000563149 SH2B3Q9UQQ2 575 aa12.47□□□□□ -0.41
USB1-207ENST00000563149 GRIP1Q9Y3R0 1128 aa12.47□□□□□ -0.41
USB1-207ENST00000563149 RPL36Q9Y3U8 105 aaKnown RBP12.47□□□□□ -0.41
USB1-207ENST00000563149 SAP18O00422 153 aaKnown RBP12.46□□□□□ -0.41
USB1-207ENST00000563149 SLITRK5O94991 958 aa12.46□□□□□ -0.41
USB1-207ENST00000563149 MFN2O95140 757 aa12.46□□□□□ -0.41
USB1-207ENST00000563149 ADH1AP07327 375 aa12.46□□□□□ -0.41
USB1-207ENST00000563149 DDCP20711 480 aa12.46□□□□□ -0.41
USB1-207ENST00000563149 CA8P35219 290 aa12.46□□□□□ -0.41
USB1-207ENST00000563149 CASP3P42574 277 aa12.46□□□□□ -0.41
USB1-207ENST00000563149 CRISP3P54108 245 aa12.46□□□□□ -0.41
USB1-207ENST00000563149 TSTA3Q13630 321 aaPredicted RBP12.46□□□□□ -0.41
USB1-207ENST00000563149 PUM1Q14671 1186 aaKnown RBP eCLIP12.46□□□□□ -0.41
USB1-207ENST00000563149 SSX1Q16384 188 aa12.46□□□□□ -0.41
USB1-207ENST00000563149 OCLNQ16625 522 aa12.46□□□□□ -0.41
USB1-207ENST00000563149 PRSS53Q2L4Q9 553 aa12.46□□□□□ -0.41
USB1-207ENST00000563149 LRIT3Q3SXY7 679 aa12.46□□□□□ -0.41
USB1-207ENST00000563149 SOWAHCQ53LP3 525 aaPredicted RBP12.46□□□□□ -0.41
USB1-207ENST00000563149 LY6G5CQ5SRR4 150 aa12.46□□□□□ -0.41
USB1-207ENST00000563149 PRAMEF14Q5SWL7 426 aa12.46□□□□□ -0.41
USB1-207ENST00000563149 PRAMEF13Q5VWM6 474 aa12.46□□□□□ -0.41
USB1-207ENST00000563149 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.46□□□□□ -0.41
USB1-207ENST00000563149 TOX2Q96NM4 488 aa12.46□□□□□ -0.41
USB1-207ENST00000563149 OPALINQ96PE5 141 aa12.46□□□□□ -0.41
USB1-207ENST00000563149 MND1Q9BWT6 205 aa12.46□□□□□ -0.41
USB1-207ENST00000563149 RHBGQ9H310 441 aa12.46□□□□□ -0.41
USB1-207ENST00000563149 GPR34Q9UPC5 381 aa12.46□□□□□ -0.41
USB1-207ENST00000563149 LSM2Q9Y333 95 aaKnown RBP12.46□□□□□ -0.41
USB1-207ENST00000563149 MMP20O60882 483 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 ENTPD6O75354 484 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 GPX5O75715 221 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 UGT2B17O75795 530 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 GSTT2P0CG29 244 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 GSTT2BP0CG30 244 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 SPNP16150 400 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 FUT4P22083 530 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 KELP23276 732 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 CXCR2P25025 360 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 PSMA1P25786 263 aaKnown RBP12.46□□□□□ -0.42
USB1-207ENST00000563149 ACADLP28330 430 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 CCR2P41597 374 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 LIM2P55344 173 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 ALDH6A1Q02252 535 aaKnown RBP12.46□□□□□ -0.42
USB1-207ENST00000563149 CNTN1Q12860 1018 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 CYP27C1Q4G0S4 372 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 IER5LQ5T953 404 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 CASP12Q6UXS9 341 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 PARS2Q7L3T8 475 aaKnown RBP12.46□□□□□ -0.42
USB1-207ENST00000563149 TRMT11Q7Z4G4 463 aaKnown RBP12.46□□□□□ -0.42
USB1-207ENST00000563149 FAM129CQ86XR2 697 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 LINC00471Q8N535 108 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 PROKR2Q8NFJ6 384 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 IL17RDQ8NFM7 739 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 OR8J1Q8NGP2 316 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 CYB5D2Q8WUJ1 264 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 RAD51AP1Q96B01 352 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 ZNF354BQ96LW1 612 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 WDFY2Q96P53 400 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 QRFPRQ96P65 431 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 ZNF607Q96SK3 696 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 ASPNQ9BXN1 380 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 SPNS1Q9H2V7 528 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 PELI2Q9HAT8 420 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 SMURF1Q9HCE7 757 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 HHATLQ9HCP6 504 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 SLC6A14Q9UN76 642 aa12.46□□□□□ -0.42
USB1-207ENST00000563149 LTBP2Q14767 1821 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 TRBV4-1A0A0J9YWV2 114 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 SLC35F4A4IF30 521 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 M0R129 80 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 FFAR1O14842 300 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 CCL16O15467 120 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 PDPK1O15530 556 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 CXCL14O95715 111 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 SOD1P00441 154 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 H1F0P07305 194 aaKnown RBP12.45□□□□□ -0.42
USB1-207ENST00000563149 PTPN2P17706 415 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 S100A1P23297 94 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 ELAVL4P26378 380 aaKnown RBP12.45□□□□□ -0.42
USB1-207ENST00000563149 POU1F1P28069 291 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 FRKP42685 505 aaPredicted RBP12.45□□□□□ -0.42
USB1-207ENST00000563149 KCNJ5P48544 419 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 RORCP51449 518 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 COX10Q12887 443 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 HEPACAMQ14CZ8 416 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 SPHARQ15513 63 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 ZNF77Q15935 545 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 SLC25A30Q5SVS4 291 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 MFSD4BQ5TF39 518 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 AGAP6Q5VW22 663 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 ZNF544Q6NX49 715 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 SLC39A5Q6ZMH5 540 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 RTL10Q7L3V2 364 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 VN1R5Q7Z5H4 357 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 TRAPPC5Q8IUR0 188 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 HORMAD2Q8N7B1 307 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 NANOGP1Q8N7R0 232 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 VN1R2Q8NFZ6 395 aa12.45□□□□□ -0.42
USB1-207ENST00000563149 OR9Q1Q8NGQ5 310 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms