RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 HECTD3Q5T447 861 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 LINC00242Q5T6M2 205 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 CD164L2Q6UWJ8 174 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 KRT77Q7Z794 578 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 CACUL1Q86Y37 369 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 ZBED8Q8IZ13 594 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 SMYD1Q8NB12 490 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 RFT1Q96AA3 541 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 CFAP36Q96G28 342 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 CDHR1Q96JP9 859 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 CCDC28BQ9BUN5 200 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 DPEP3Q9H4B8 488 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 ZDHHC6Q9H6R6 413 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 COPS7BQ9H9Q2 264 aaPredicted RBP2.28□□□□□ -2.04
CHD9-207ENST00000562806 ELL3Q9HB65 397 aaPredicted RBP2.28□□□□□ -2.04
CHD9-207ENST00000562806 CUTCQ9NTM9 273 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 LIPT1Q9Y234 373 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 EXOC6BQ9Y2D4 811 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 ACEP12821 1306 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 ATP6AP2A0A1C7CYW4 349 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 OR5H15A6NDH6 313 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 FOXI3A8MTJ6 420 aaPredicted RBP2.27□□□□□ -2.05
CHD9-207ENST00000562806 ANHXE9PGG2 379 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 H0Y626 953 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 PHOX2AO14813 284 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 ST8SIA3O43173 380 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 KBTBD11O94819 623 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 GLCEO94923 617 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 OR6B1O95007 311 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 OR6A2O95222 327 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 SLC16A8O95907 504 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 GAS8O95995 478 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 SNRPCP09234 159 aaKnown RBP2.27□□□□□ -2.05
CHD9-207ENST00000562806 SUPT20HL2P0C7V6 817 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 MATKP42679 507 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 ALDH3B1P43353 468 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 PEX3P56589 373 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 STX1BP61266 288 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 NAAAQ02083 359 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 RUNX3Q13761 415 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 SPHARQ15513 63 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 STXBP2Q15833 593 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 Q1RN00 199 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 TYSND1Q2T9J0 566 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 ATAD3CQ5T2N8 411 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 SHQ1Q6PI26 577 aaKnown RBP2.27□□□□□ -2.05
CHD9-207ENST00000562806 ZNF730Q6ZMV8 503 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 GBP6Q6ZN66 633 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 HIPK1Q86Z02 1210 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 ARL14Q8N4G2 192 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 SPATA18Q8TC71 538 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 ITLN1Q8WWA0 313 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 S1PR3Q99500 378 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 SSX3Q99909 188 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 C19orf43Q9BQ61 176 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 ZNF350Q9GZX5 532 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 ZNF665Q9H7R5 613 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 GRPEL1Q9HAV7 217 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.27□□□□□ -2.05
CHD9-207ENST00000562806 ABCB8Q9NUT2 735 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 SEPT10Q9P0V9 454 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 KCNK6Q9Y257 313 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 SH3GLB1Q9Y371 365 aa2.27□□□□□ -2.05
CHD9-207ENST00000562806 SALL1Q9NSC2 1324 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 LOC390937A0A1W2PQ73 354 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 ZNF354AO60765 605 aaPredicted RBP2.26□□□□□ -2.05
CHD9-207ENST00000562806 PRDM1O75626 825 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 CENPBP07199 599 aaPredicted RBP2.26□□□□□ -2.05
CHD9-207ENST00000562806 FHP07954 510 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 ODC1P11926 461 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 CPA3P15088 417 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 CALML3P27482 149 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 STIP1P31948 543 aaKnown RBP2.26□□□□□ -2.05
CHD9-207ENST00000562806 RPS27AP62979 156 aaKnown RBP2.26□□□□□ -2.05
CHD9-207ENST00000562806 ASIC1P78348 528 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 HSPA14Q0VDF9 509 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 RPS6KA1Q15418 735 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 SHROOM1Q2M3G4 852 aaPredicted RBP2.26□□□□□ -2.05
CHD9-207ENST00000562806 CCDC158Q5M9N0 1113 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 CAPN13Q6MZZ7 669 aaPredicted RBP2.26□□□□□ -2.05
CHD9-207ENST00000562806 REG3GQ6UW15 175 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 ABRAXAS1Q6UWZ7 409 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 FAM47EQ6ZV65 393 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 HSCBQ8IWL3 235 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 THEM5Q8N1Q8 247 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 FBXL16Q8N461 479 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 NKAIN3Q8N8D7 197 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 CCDC197Q8NCU1 140 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 OR4Q3Q8NH05 313 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 TYMSOSQ8TAI1 123 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 KIAA1524Q8TCG1 905 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 PRCCQ92733 491 aaPredicted RBP2.26□□□□□ -2.05
CHD9-207ENST00000562806 GGHQ92820 318 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 ESAMQ96AP7 390 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 C16orf58Q96GQ5 468 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 SERAC1Q96JX3 654 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 ERGIC2Q96RQ1 377 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 RAB40CQ96S21 281 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 SLC39A8Q9C0K1 460 aa2.26□□□□□ -2.05
CHD9-207ENST00000562806 NT5DC2Q9H857 520 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms