RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 PLAC1Q9HBJ0 212 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 XAB2Q9HCS7 855 aaKnown RBP10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 SLC6A5Q9Y345 797 aa10.77□□□□□ -0.69
NSMCE1-202ENST00000561960 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 A0A1B0GVC2 190 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 A0A1W2PPR1 153 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 MAGEB16A2A368 324 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 OR14I1A6ND48 311 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 LRIT2A6NDA9 550 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 LRRC3CA6NJW4 275 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 WASHC1A8K0Z3 465 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 EIF3FO00303 357 aaPredicted RBP10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 CYR61O00622 381 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 PRAMEF4O60810 478 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 RAF1P04049 648 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 INHBBP09529 407 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 CCDC175P0C221 793 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 PGAM1P18669 254 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 PTMSP20962 102 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 MAGEA3P43357 314 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 HSD17B7P56937 341 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 STXBP1P61764 594 aaKnown RBP10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 TSNQ15631 228 aaKnown RBP10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 BBS9Q3SYG4 887 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 DCST1Q5T197 706 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 PRAMEF9Q5VWM5 478 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 LRRC8EQ6NSJ5 796 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 ADGRD1Q6QNK2 874 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 ZNF793Q6ZN11 406 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 STRA8Q7Z7C7 330 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 C9orf40Q8IXQ3 194 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 TXLNBQ8N3L3 684 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 TMEM132CQ8N3T6 1108 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 NAT8LQ8N9F0 302 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 MYRIPQ8NFW9 859 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 OR10G3Q8NGC4 313 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 EXT2Q93063 718 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 SARAFQ96BY9 339 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 ZNF703Q9H7S9 590 aaPredicted RBP10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 COPS7BQ9H9Q2 264 aaPredicted RBP10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 CHMP2BQ9UQN3 213 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 PSAT1Q9Y617 370 aa10.76□□□□□ -0.69
NSMCE1-202ENST00000561960 WDR1O75083 606 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 TRAPPC6AO75865 159 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 LY6G6DO95868 133 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 C1GALT1C1LP0DN25 315 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 MLNP12872 115 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 GDF1P27539 372 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 ASCL1P50553 236 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 ZNF136P52737 540 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 AP1S2P56377 157 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 PCBP2Q15366 365 aaKnown RBP eCLIP10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 TOMM20Q15388 145 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 TERF2Q15554 542 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 RIPPLY2Q5TAB7 128 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 CCDC137Q6PK04 289 aaKnown RBP10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 TMIGD1Q6UXZ0 262 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 SLCO4C1Q6ZQN7 724 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 FRA10AC1Q70Z53 315 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 GAS2L3Q86XJ1 694 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 LIX1Q8N485 282 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 SNX31Q8N9S9 440 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 LRRN4CLQ8ND94 238 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 MCUQ8NE86 351 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 ZNF721Q8TF20 911 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 ANKRD49Q8WVL7 239 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 ATL1Q8WXF7 558 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 C18orf12Q96KH6 178 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 TRIB1Q96RU8 372 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 REXO4Q9GZR2 422 aaKnown RBP10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 PROK2Q9HC23 129 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 PPIEQ9UNP9 301 aaKnown RBP10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 CAMK2AQ9UQM7 478 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 ZKSCAN5Q9Y2L8 839 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 KCNE2Q9Y6J6 123 aa10.75□□□□□ -0.69
NSMCE1-202ENST00000561960 COL6A5A8TX70 2615 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 TUBAL3A6NHL2 446 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 ANKDD1BA6NHY2 528 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 SYT5O00445 386 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 FGF17O60258 216 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 SUSD5O60279 629 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 FAM155BO75949 473 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 ACSL3O95573 720 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 CD22P20273 847 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 DUSP8Q13202 625 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 ACSF3Q4G176 576 aaPredicted RBP10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 TEDDM1Q5T9Z0 273 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 NIPAL1Q6NVV3 410 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 TRIM40Q6P9F5 258 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 ABHD17CQ6PCB6 329 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 POMZP3Q6PJE2 187 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 RGS9BPQ6ZS82 235 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 CAPN12Q6ZSI9 719 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 UBE3DQ7Z6J8 389 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 LUZP2Q86TE4 346 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 BIVMQ86UB2 503 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 ANKMY2Q8IV38 441 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 GPALPP1Q8IXQ4 340 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 ZNF595Q8IYB9 648 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 PRR22Q8IZ63 422 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms