RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 SLC48A1Q6P1K1 146 aa8.83□□□□□ -1
HERC1-206ENST00000559996 GK5Q6ZS86 529 aa8.83□□□□□ -1
HERC1-206ENST00000559996 IKBIPQ70UQ0 350 aa8.83□□□□□ -1
HERC1-206ENST00000559996 OVCH1Q7RTY7 1134 aa8.83□□□□□ -1
HERC1-206ENST00000559996 MIER2Q8N344 545 aa8.83□□□□□ -1
HERC1-206ENST00000559996 SUN3Q8TAQ9 357 aa8.83□□□□□ -1
HERC1-206ENST00000559996 TESCQ96BS2 214 aa8.83□□□□□ -1
HERC1-206ENST00000559996 FAM122AQ96E09 287 aa8.83□□□□□ -1
HERC1-206ENST00000559996 CNRIP1Q96F85 164 aaPredicted RBP8.83□□□□□ -1
HERC1-206ENST00000559996 ZNF764Q96H86 408 aaPredicted RBP8.83□□□□□ -1
HERC1-206ENST00000559996 PEX11GQ96HA9 241 aa8.83□□□□□ -1
HERC1-206ENST00000559996 ZPBPQ9BS86 351 aa8.83□□□□□ -1
HERC1-206ENST00000559996 TGIF2Q9GZN2 237 aa8.83□□□□□ -1
HERC1-206ENST00000559996 SLC26A1Q9H2B4 701 aa8.83□□□□□ -1
HERC1-206ENST00000559996 REEP4Q9H6H4 257 aa8.83□□□□□ -1
HERC1-206ENST00000559996 SLAMF7Q9NQ25 335 aa8.83□□□□□ -1
HERC1-206ENST00000559996 PRDM9Q9NQV7 894 aa8.83□□□□□ -1
HERC1-206ENST00000559996 ARL8BQ9NVJ2 186 aa8.83□□□□□ -1
HERC1-206ENST00000559996 TMEM45AQ9NWC5 275 aa8.83□□□□□ -1
HERC1-206ENST00000559996 IRAK4Q9NWZ3 460 aa8.83□□□□□ -1
HERC1-206ENST00000559996 LYARQ9NX58 379 aaKnown RBP8.83□□□□□ -1
HERC1-206ENST00000559996 CCDC167Q9P0B6 97 aa8.83□□□□□ -1
HERC1-206ENST00000559996 AKAP7Q9P0M2 348 aaPredicted RBP8.83□□□□□ -1
HERC1-206ENST00000559996 HCN3Q9P1Z3 774 aa8.83□□□□□ -1
HERC1-206ENST00000559996 C5AR2Q9P296 337 aa8.83□□□□□ -1
HERC1-206ENST00000559996 MAP10Q9P2G4 905 aa8.83□□□□□ -1
HERC1-206ENST00000559996 TRIM33Q9UPN9 1127 aa8.83□□□□□ -1
HERC1-206ENST00000559996 CROCCQ5TZA2 2017 aa8.83□□□□□ -1
HERC1-206ENST00000559996 IGKV3D-11A0A0A0MRZ8 115 aa8.82□□□□□ -1
HERC1-206ENST00000559996 C1orf226A1L170 272 aa8.82□□□□□ -1
HERC1-206ENST00000559996 FAM234BA2RU67 622 aa8.82□□□□□ -1
HERC1-206ENST00000559996 SLC22A2O15244 555 aa8.82□□□□□ -1
HERC1-206ENST00000559996 FGF17O60258 216 aa8.82□□□□□ -1
HERC1-206ENST00000559996 PRMT3O60678 531 aa8.82□□□□□ -1
HERC1-206ENST00000559996 CPNE3O75131 537 aaKnown RBP8.82□□□□□ -1
HERC1-206ENST00000559996 KLF7O75840 302 aaPredicted RBP8.82□□□□□ -1
HERC1-206ENST00000559996 DCTN3O75935 186 aa8.82□□□□□ -1
HERC1-206ENST00000559996 DXOO77932 396 aaKnown RBP8.82□□□□□ -1
HERC1-206ENST00000559996 TNFSF15O95150 251 aa8.82□□□□□ -1
HERC1-206ENST00000559996 HBQ1P09105 142 aa8.82□□□□□ -1
HERC1-206ENST00000559996 JMJD7P0C870 316 aa8.82□□□□□ -1
HERC1-206ENST00000559996 PCSK2P16519 638 aa8.82□□□□□ -1
HERC1-206ENST00000559996 HOXB9P17482 250 aaPredicted RBP8.82□□□□□ -1
HERC1-206ENST00000559996 PRPS1L1P21108 318 aa8.82□□□□□ -1
HERC1-206ENST00000559996 CPN2P22792 545 aa8.82□□□□□ -1
HERC1-206ENST00000559996 PTPN6P29350 595 aa8.82□□□□□ -1
HERC1-206ENST00000559996 SLC5A2P31639 672 aa8.82□□□□□ -1
HERC1-206ENST00000559996 ASMTP46597 345 aa8.82□□□□□ -1
HERC1-206ENST00000559996 AVPR1BP47901 424 aa8.82□□□□□ -1
HERC1-206ENST00000559996 POLR2JP52435 117 aaKnown RBP8.82□□□□□ -1
HERC1-206ENST00000559996 IGLV3-21P80748 117 aaPredicted RBP8.82□□□□□ -1
HERC1-206ENST00000559996 DCDP81605 110 aaKnown RBP8.82□□□□□ -1
HERC1-206ENST00000559996 SHC2P98077 582 aa8.82□□□□□ -1
HERC1-206ENST00000559996 RHAGQ02094 409 aa8.82□□□□□ -1
HERC1-206ENST00000559996 TNFRSF17Q02223 184 aa8.82□□□□□ -1
HERC1-206ENST00000559996 GABPB1Q06547 395 aaPredicted RBP8.82□□□□□ -1
HERC1-206ENST00000559996 ABHD18Q0P651 414 aa8.82□□□□□ -1
HERC1-206ENST00000559996 RCAN2Q14206 197 aa8.82□□□□□ -1
HERC1-206ENST00000559996 PUM1Q14671 1186 aaKnown RBP eCLIP8.82□□□□□ -1
HERC1-206ENST00000559996 NKG7Q16617 165 aa8.82□□□□□ -1
HERC1-206ENST00000559996 SPRED3Q2MJR0 410 aa8.82□□□□□ -1
HERC1-206ENST00000559996 AGKQ53H12 422 aa8.82□□□□□ -1
HERC1-206ENST00000559996 PAGE3Q5JUK9 113 aa8.82□□□□□ -1
HERC1-206ENST00000559996 SPANXN4Q5MJ08 99 aa8.82□□□□□ -1
HERC1-206ENST00000559996 NIPAL1Q6NVV3 410 aa8.82□□□□□ -1
HERC1-206ENST00000559996 CYB5D1Q6P9G0 228 aa8.82□□□□□ -1
HERC1-206ENST00000559996 FAM198BQ6UWH4 519 aa8.82□□□□□ -1
HERC1-206ENST00000559996 TRPM8Q7Z2W7 1104 aa8.82□□□□□ -1
HERC1-206ENST00000559996 RETREG3Q86VR2 466 aa8.82□□□□□ -1
HERC1-206ENST00000559996 DTX1Q86Y01 620 aa8.82□□□□□ -1
HERC1-206ENST00000559996 TICAM1Q8IUC6 712 aa8.82□□□□□ -1
HERC1-206ENST00000559996 ZC3H7AQ8IWR0 971 aaKnown RBP8.82□□□□□ -1
HERC1-206ENST00000559996 SCUBE1Q8IWY4 988 aa8.82□□□□□ -1
HERC1-206ENST00000559996 TMEM132CQ8N3T6 1108 aa8.82□□□□□ -1
HERC1-206ENST00000559996 AMER2Q8N7J2 671 aa8.82□□□□□ -1
HERC1-206ENST00000559996 FAM47BQ8NA70 645 aa8.82□□□□□ -1
HERC1-206ENST00000559996 GALNT6Q8NCL4 622 aa8.82□□□□□ -1
HERC1-206ENST00000559996 OR8J2Q8NGG1 315 aa8.82□□□□□ -1
HERC1-206ENST00000559996 ERP27Q96DN0 273 aa8.82□□□□□ -1
HERC1-206ENST00000559996 CLIP3Q96DZ5 547 aa8.82□□□□□ -1
HERC1-206ENST00000559996 MTERF3Q96E29 417 aa8.82□□□□□ -1
HERC1-206ENST00000559996 LRRC37BQ96QE4 947 aa8.82□□□□□ -1
HERC1-206ENST00000559996 SPSB2Q99619 263 aa8.82□□□□□ -1
HERC1-206ENST00000559996 MESP1Q9BRJ9 268 aa8.82□□□□□ -1
HERC1-206ENST00000559996 ASPSCR1Q9BZE9 553 aa8.82□□□□□ -1
HERC1-206ENST00000559996 ULBP3Q9BZM4 244 aa8.82□□□□□ -1
HERC1-206ENST00000559996 DPY30Q9C005 99 aa8.82□□□□□ -1
HERC1-206ENST00000559996 NRSN2Q9GZP1 204 aa8.82□□□□□ -1
HERC1-206ENST00000559996 CHST8Q9H2A9 424 aa8.82□□□□□ -1
HERC1-206ENST00000559996 RPF2Q9H7B2 306 aaKnown RBP8.82□□□□□ -1
HERC1-206ENST00000559996 COPS7BQ9H9Q2 264 aaPredicted RBP8.82□□□□□ -1
HERC1-206ENST00000559996 SERHLQ9NQF3 203 aa8.82□□□□□ -1
HERC1-206ENST00000559996 NECTIN3Q9NQS3 549 aa8.82□□□□□ -1
HERC1-206ENST00000559996 MS4A12Q9NXJ0 267 aa8.82□□□□□ -1
HERC1-206ENST00000559996 CTSFQ9UBX1 484 aa8.82□□□□□ -1
HERC1-206ENST00000559996 NDOR1Q9UHB4 597 aa8.82□□□□□ -1
HERC1-206ENST00000559996 KLK13Q9UKR3 277 aa8.82□□□□□ -1
HERC1-206ENST00000559996 ACSL6Q9UKU0 697 aa8.82□□□□□ -1
HERC1-206ENST00000559996 CDC14AQ9UNH5 594 aa8.82□□□□□ -1
HERC1-206ENST00000559996 NEUROG3Q9Y4Z2 214 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms