RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 TRIM48Q8IWZ4 208 aa12.27□□□□□ -0.44
SMAD3-207ENST00000558763 ZCCHC7Q8N3Z6 543 aaKnown RBP12.27□□□□□ -0.44
SMAD3-207ENST00000558763 ACOT4Q8N9L9 421 aa12.27□□□□□ -0.44
SMAD3-207ENST00000558763 OR5AK3PQ8NH89 298 aa12.27□□□□□ -0.44
SMAD3-207ENST00000558763 PSMA8Q8TAA3 256 aa12.27□□□□□ -0.44
SMAD3-207ENST00000558763 NT5CQ8TCD5 201 aa12.27□□□□□ -0.44
SMAD3-207ENST00000558763 ZDHHC1Q8WTX9 485 aa12.27□□□□□ -0.44
SMAD3-207ENST00000558763 N4BP2L2Q92802 583 aaPredicted RBP12.27□□□□□ -0.44
SMAD3-207ENST00000558763 KCNC2Q96PR1 638 aa12.27□□□□□ -0.44
SMAD3-207ENST00000558763 VCXQ9H320 206 aa12.27□□□□□ -0.44
SMAD3-207ENST00000558763 C1GALT1Q9NS00 363 aa12.27□□□□□ -0.44
SMAD3-207ENST00000558763 CORO2BQ9UQ03 480 aa12.27□□□□□ -0.44
SMAD3-207ENST00000558763 A0A1W2PR48 441 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 OR5K4A6NMS3 321 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 LMO7DNF2Z398 122 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 KHNYNO15037 678 aaKnown RBP12.27□□□□□ -0.45
SMAD3-207ENST00000558763 PDPK1O15530 556 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 PRAMEF10O60809 474 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 SYPP08247 313 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 CERS1P27544 350 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 KDELR2P33947 212 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 PCGF2P35227 344 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 RXRGP48443 463 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 CASP9P55211 416 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 PDK3Q15120 406 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 PLA2G2CQ5R387 149 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 TMTC4Q5T4D3 741 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 SPESP1Q6UW49 350 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 TMEM26Q6ZUK4 368 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 ZNF761Q86XN6 746 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-207ENST00000558763 EID3Q8N140 333 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 SLC25A45Q8N413 288 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 KCT2Q8NC54 265 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 OR10G6Q8NH81 332 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 PYURFQ96I23 114 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 C9orf16Q9BUW7 83 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 EHD3Q9NZN3 535 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 RAPGEFL1Q9UHV5 662 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 ATG4BQ9Y4P1 393 aa12.27□□□□□ -0.45
SMAD3-207ENST00000558763 SPEGQ15772 3267 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 CABIN1Q9Y6J0 2220 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 LNP1A1A4G5 178 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 EI24O14681 340 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 ZW10O43264 779 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 SH3BP5O60239 455 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 DEAF1O75398 565 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-207ENST00000558763 CER1O95813 267 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 SMIM10L1P0DMW3 83 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 TSFMP43897 325 aaKnown RBP12.26□□□□□ -0.45
SMAD3-207ENST00000558763 ALDH9A1P49189 494 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 RAB8AP61006 207 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 MRPS35P82673 323 aaKnown RBP12.26□□□□□ -0.45
SMAD3-207ENST00000558763 FADDQ13158 208 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 MAP7Q14244 749 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 IQCCQ4KMZ1 466 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 LRRC23Q53EV4 343 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-207ENST00000558763 SAXO2Q658L1 398 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 TMEM214Q6NUQ4 689 aaKnown RBP12.26□□□□□ -0.45
SMAD3-207ENST00000558763 FIGLAQ6QHK4 219 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 CBLL1Q75N03 491 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 CARM1Q86X55 608 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 RNF130Q86XS8 419 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 KLHL6Q8WZ60 621 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 OR5P2Q8WZ92 322 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 TMBIM1Q969X1 311 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 EXOSC8Q96B26 276 aaKnown RBP12.26□□□□□ -0.45
SMAD3-207ENST00000558763 SMIM10Q96HG1 83 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 TMEM38AQ9H6F2 299 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 CES1P1Q9UKY3 287 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 MAGED1Q9Y5V3 778 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-207ENST00000558763 RALGAPA1Q6GYQ0 2036 aa12.26□□□□□ -0.45
SMAD3-207ENST00000558763 GSAPA4D1B5 854 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 MAGEA13PA6NCF6 341 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 PLOD2O00469 737 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 TXNDC9O14530 226 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 AIFM1O95831 613 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 DRD2P14416 443 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 PVRP15151 417 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 UQCRC2P22695 453 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 CDK9P50750 372 aaKnown RBP12.25□□□□□ -0.45
SMAD3-207ENST00000558763 GTF2A1P52655 376 aaPredicted RBP12.25□□□□□ -0.45
SMAD3-207ENST00000558763 IST1P53990 364 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 TXNL4AP83876 142 aaKnown RBP12.25□□□□□ -0.45
SMAD3-207ENST00000558763 RELAQ04206 551 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 DUSP2Q05923 314 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 SLAMF1Q13291 335 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 MLC1Q15049 377 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 SF3A2Q15428 464 aaKnown RBP12.25□□□□□ -0.45
SMAD3-207ENST00000558763 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.25□□□□□ -0.45
SMAD3-207ENST00000558763 TRIM40Q6P9F5 258 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 ZNF438Q7Z4V0 828 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 VTCN1Q7Z7D3 282 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 ASPGQ86U10 573 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 TBC1D19Q8N5T2 526 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 NATD1Q8N6N6 113 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 TRIML2Q8N7C3 387 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 UTP15Q8TED0 518 aaKnown RBP12.25□□□□□ -0.45
SMAD3-207ENST00000558763 RSC1A1Q92681 617 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 TFAP2CQ92754 450 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 GAL3ST3Q96A11 431 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms