RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 UBQLN3Q9H347 655 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 L2HGDHQ9H9P8 463 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 CALHM2Q9HA72 323 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 EIF2B3Q9NR50 452 aaKnown RBP10.81□□□□□ -0.68
SMAD3-206ENST00000558739 PRTFDC1Q9NRG1 225 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 QPCTLQ9NXS2 382 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 ADAMTS6Q9UKP5 1117 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 CNOT11Q9UKZ1 510 aaKnown RBP10.81□□□□□ -0.68
SMAD3-206ENST00000558739 RIMKLBQ9ULI2 386 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 MED16Q9Y2X0 877 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 CLCA3PQ9Y6N3 262 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 HRKO00198 91 aa10.8□□□□□ -0.68
SMAD3-206ENST00000558739 TRIM3O75382 744 aaPredicted RBP10.8□□□□□ -0.68
SMAD3-206ENST00000558739 ETHE1O95571 254 aa10.8□□□□□ -0.68
SMAD3-206ENST00000558739 C1QAP02745 245 aa10.8□□□□□ -0.68
SMAD3-206ENST00000558739 IFNA16P05015 189 aa10.8□□□□□ -0.68
SMAD3-206ENST00000558739 THBDP07204 575 aa10.8□□□□□ -0.68
SMAD3-206ENST00000558739 SOD3P08294 240 aa10.8□□□□□ -0.68
SMAD3-206ENST00000558739 ADRA1DP25100 572 aa10.8□□□□□ -0.68
SMAD3-206ENST00000558739 GRK3P35626 688 aa10.8□□□□□ -0.68
SMAD3-206ENST00000558739 CDK9P50750 372 aaKnown RBP10.8□□□□□ -0.68
SMAD3-206ENST00000558739 NAGLUP54802 743 aa10.8□□□□□ -0.68
SMAD3-206ENST00000558739 TPM4P67936 248 aa10.8□□□□□ -0.68
SMAD3-206ENST00000558739 RGS1Q08116 209 aa10.8□□□□□ -0.68
SMAD3-206ENST00000558739 NAE1Q13564 534 aa10.8□□□□□ -0.68
SMAD3-206ENST00000558739 TMEM249Q2WGJ8 235 aa10.8□□□□□ -0.68
SMAD3-206ENST00000558739 PDLIM3Q53GG5 364 aaPredicted RBP10.8□□□□□ -0.68
SMAD3-206ENST00000558739 CES3Q6UWW8 571 aa10.8□□□□□ -0.68
SMAD3-206ENST00000558739 ANKRD53Q8N9V6 530 aa10.8□□□□□ -0.68
SMAD3-206ENST00000558739 NT5CQ8TCD5 201 aa10.8□□□□□ -0.68
SMAD3-206ENST00000558739 LCORQ96JN0 433 aaPredicted RBP10.8□□□□□ -0.68
SMAD3-206ENST00000558739 RUNDC3BQ96NL0 473 aa10.8□□□□□ -0.68
SMAD3-206ENST00000558739 GNRHR2Q96P88 292 aa10.8□□□□□ -0.68
SMAD3-206ENST00000558739 PANX2Q96RD6 677 aa10.8□□□□□ -0.68
SMAD3-206ENST00000558739 KCNK17Q96T54 332 aa10.8□□□□□ -0.68
SMAD3-206ENST00000558739 OPN3Q9H1Y3 402 aaPredicted RBP10.8□□□□□ -0.68
SMAD3-206ENST00000558739 TREX1Q9NSU2 369 aa10.8□□□□□ -0.68
SMAD3-206ENST00000558739 IGHV4-30-2A0A087WSY4 118 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 A0A1W2PNV4 684 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 HS3ST1O14792 307 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 RCBTB2O95199 551 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 HPNP05981 417 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 SMIM10L1P0DMW3 83 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 NPPBP16860 134 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 ZNF16P17020 682 aaPredicted RBP10.79□□□□□ -0.68
SMAD3-206ENST00000558739 NMBRP28336 390 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 CD79BP40259 229 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 UBASH3AP57075 661 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 SKP1P63208 163 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 ID2Q02363 134 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 SRYQ05066 204 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 PIGGQ5H8A4 983 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 NHSL2Q5HYW2 709 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 TMEM64Q6YI46 380 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 PPP1R21Q6ZMI0 780 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 CYHR1Q6ZMK1 362 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 UBE2R2Q712K3 238 aaPredicted RBP10.79□□□□□ -0.68
SMAD3-206ENST00000558739 ADGRE4PQ86SQ3 457 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 PRUNE1Q86TP1 453 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 LINC00523Q86TU6 105 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 ABHD11Q8NFV4 315 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 DOK4Q8TEW6 326 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 ABTB1Q969K4 478 aaPredicted RBP10.79□□□□□ -0.68
SMAD3-206ENST00000558739 PYCR2Q96C36 320 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 IQCDQ96DY2 449 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 SMIM10Q96HG1 83 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 ZNF597Q96LX8 424 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 OR4K3Q96R72 315 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 OSBPL8Q9BZF1 889 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 FAM129AQ9BZQ8 928 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 RBSNQ9H1K0 784 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 PIGMQ9H3S5 423 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 CLCF1Q9UBD9 225 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 GDF2Q9UK05 429 aaPredicted RBP10.79□□□□□ -0.68
SMAD3-206ENST00000558739 AMFRQ9UKV5 643 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 INTUQ9ULD6 942 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 TFR2Q9UP52 801 aa10.79□□□□□ -0.68
SMAD3-206ENST00000558739 TRBC2A0A5B9 178 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 C17orf105B2RV13 164 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 GOLGA6L19H0YKK7 550 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 OVOL3O00110 214 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 KLF4O43474 513 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 TGM6O95932 706 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 CYP4B1P13584 511 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 SRD5A1P18405 259 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 IGFBP5P24593 272 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 SCTRP47872 440 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 CCR8P51685 355 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 CASP9P55211 416 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 HSD17B7P56937 341 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 BTN3A2P78410 334 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 RCAN2Q14206 197 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 MPEG1Q2M385 716 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 FAM174BQ3ZCQ3 159 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 TOR1AIP1Q5JTV8 583 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 AGTRAPQ6RW13 159 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 YRDCQ86U90 279 aaKnown RBP10.78□□□□□ -0.68
SMAD3-206ENST00000558739 MEX3DQ86XN8 651 aaKnown RBP10.78□□□□□ -0.68
SMAD3-206ENST00000558739 MPP5Q8N3R9 675 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 TMEM132CQ8N3T6 1108 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms