RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 LDLRP01130 860 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 FGF5P12034 268 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 ME2P23368 584 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 TACR1P25103 407 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 CMPK1P30085 196 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 PEBP1P30086 187 aaKnown RBP12.78□□□□□ -0.36
TMED3-205ENST00000558562 SERPINB1P30740 379 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 TIA1P31483 386 aaKnown RBP eCLIP12.78□□□□□ -0.36
TMED3-205ENST00000558562 HNRNPH1P31943 449 aaKnown RBP12.78□□□□□ -0.36
TMED3-205ENST00000558562 SLC7A2P52569 658 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 DGKQP52824 942 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 UBE2IP63279 158 aaKnown RBP12.78□□□□□ -0.36
TMED3-205ENST00000558562 YBX1P67809 324 aaKnown RBP12.78□□□□□ -0.36
TMED3-205ENST00000558562 ABATP80404 500 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 PRDX1Q06830 199 aaKnown RBP12.78□□□□□ -0.36
TMED3-205ENST00000558562 IL10RAQ13651 578 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 CEACAM7Q14002 265 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 CAPRIN1Q14444 709 aaKnown RBP12.78□□□□□ -0.36
TMED3-205ENST00000558562 KIR2DS5Q14953 304 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 FAM174BQ3ZCQ3 159 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 PAGE3Q5JUK9 113 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 C1QL3Q5VWW1 255 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 JMJD6Q6NYC1 403 aaPredicted RBP12.78□□□□□ -0.36
TMED3-205ENST00000558562 SLC2A7Q6PXP3 512 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 FAM92BQ6ZTR7 304 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 ADCK2Q7Z695 626 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 DHDDSQ86SQ9 333 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 PACS2Q86VP3 889 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 AMIGO1Q86WK6 493 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 PPP1R3BQ86XI6 285 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 KRTCAP2Q8N6L1 136 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 OR2A1Q8NGT9 310 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 CHTF18Q8WVB6 975 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 MRPS30Q9NP92 439 aaKnown RBP12.78□□□□□ -0.36
TMED3-205ENST00000558562 SLAMF7Q9NQ25 335 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 OR6C2Q9NZP2 312 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 PPT2Q9UMR5 302 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 POMPQ9Y244 141 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 PCDHGA9Q9Y5G4 932 aaKnown RBP12.78□□□□□ -0.36
TMED3-205ENST00000558562 OTOGQ6ZRI0 2925 aa12.78□□□□□ -0.36
TMED3-205ENST00000558562 ISM1B1AKI9 464 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 C21orf140B9A014 251 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 H7BY64 318 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 PRICKLE3O43900 615 aaPredicted RBP12.77□□□□□ -0.37
TMED3-205ENST00000558562 RECKO95980 971 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 TGFB1P01137 390 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 VIPP01282 170 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 IL6P05231 212 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 CHRM5P08912 532 aaPredicted RBP12.77□□□□□ -0.37
TMED3-205ENST00000558562 XRCC1P18887 633 aaPredicted RBP12.77□□□□□ -0.37
TMED3-205ENST00000558562 ELAVL4P26378 380 aaKnown RBP12.77□□□□□ -0.37
TMED3-205ENST00000558562 ASMTP46597 345 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 ACTR3P61158 418 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 CSNK1G2P78368 415 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 RAE1P78406 368 aaKnown RBP12.77□□□□□ -0.37
TMED3-205ENST00000558562 PLCL1Q15111 1095 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 UGT8Q16880 541 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.77□□□□□ -0.37
TMED3-205ENST00000558562 SPANXN4Q5MJ08 99 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 SAMD4BQ5PRF9 694 aaKnown RBP12.77□□□□□ -0.37
TMED3-205ENST00000558562 PWWP2BQ6NUJ5 590 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 TMEM26Q6ZUK4 368 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 VN1R5Q7Z5H4 357 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 DPP10Q8N608 796 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 RNF148Q8N7C7 305 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 OR4E2Q8NGC2 313 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 OR4K1Q8NGD4 311 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 CDC26Q8NHZ8 85 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 NUDT8Q8WV74 236 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 SLC13A3Q8WWT9 602 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 THAP4Q8WY91 577 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 JADE3Q92613 823 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 RSC1A1Q92681 617 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 LRRC58Q96CX6 371 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 PRAP1Q96NZ9 151 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 GPATCH1Q9BRR8 931 aaKnown RBP12.77□□□□□ -0.37
TMED3-205ENST00000558562 SLC39A3Q9BRY0 314 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 RHBGQ9H310 441 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 OR51B5Q9H339 312 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 SRMSQ9H3Y6 488 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 RNPEPL1Q9HAU8 725 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 SLC6A20Q9NP91 592 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 POT1Q9NUX5 634 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 SPHK1Q9NYA1 384 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 TMEM181Q9P2C4 612 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 SUCOQ9UBS9 1254 aaKnown RBP12.77□□□□□ -0.37
TMED3-205ENST00000558562 MAPRE3Q9UPY8 281 aa12.77□□□□□ -0.37
TMED3-205ENST00000558562 C15orf38-AP3S2A0A0A6YYH1 394 aa12.76□□□□□ -0.37
TMED3-205ENST00000558562 TRBC2A0A5B9 178 aa12.76□□□□□ -0.37
TMED3-205ENST00000558562 FEZF1A0PJY2 475 aa12.76□□□□□ -0.37
TMED3-205ENST00000558562 PCDH7O60245 1069 aa12.76□□□□□ -0.37
TMED3-205ENST00000558562 KRT36O76013 467 aa12.76□□□□□ -0.37
TMED3-205ENST00000558562 SEMA3DO95025 777 aa12.76□□□□□ -0.37
TMED3-205ENST00000558562 LRATO95237 230 aa12.76□□□□□ -0.37
TMED3-205ENST00000558562 PSMG1O95456 288 aa12.76□□□□□ -0.37
TMED3-205ENST00000558562 NPPAP01160 153 aa12.76□□□□□ -0.37
TMED3-205ENST00000558562 PGRP06401 933 aa12.76□□□□□ -0.37
TMED3-205ENST00000558562 ANXA4P09525 319 aaPredicted RBP12.76□□□□□ -0.37
TMED3-205ENST00000558562 PRPS1L1P21108 318 aa12.76□□□□□ -0.37
TMED3-205ENST00000558562 PTX3P26022 381 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms