RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 CTAGE15A4D2H0 777 aa16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 C17orf105B2RV13 164 aa16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 C4orf51C9J302 202 aa16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 CASKO14936 926 aa16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 CTNSO60931 367 aa16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 H2AFYO75367 372 aaKnown RBP16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 VPS41P49754 854 aa16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 HNRNPFP52597 415 aaKnown RBP16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 WNT3P56703 355 aa16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 HSP90AA5PQ58FG0 334 aa16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 CTAGE6Q86UF2 777 aa16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 THOC6Q86W42 341 aaKnown RBP16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 KLHDC8AQ8IYD2 350 aa16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 PM20D2Q8IYS1 436 aa16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 TMEM52Q8NDY8 209 aa16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 SLC2A12Q8TD20 617 aa16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 PTPMT1Q8WUK0 201 aaPredicted RBP16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 MAIP1Q8WWC4 291 aa16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 COPS7BQ9H9Q2 264 aaPredicted RBP16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 HOMER3Q9NSC5 361 aa16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 IARS2Q9NSE4 1012 aaKnown RBP16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 TRMT1Q9NXH9 659 aaKnown RBP16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 VTI1BQ9UEU0 232 aa16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 EIF3LQ9Y262 564 aaKnown RBP16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 ZKSCAN5Q9Y2L8 839 aa16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 CLDN16Q9Y5I7 305 aa16.41■□□□□ 0.22
TSPAN3-204ENST00000558394 MYOCOSA0A1B0GUC4 107 aa16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 HRGP04196 525 aa16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 ENO2P09104 434 aaPredicted RBP16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 RFPL3SP0C7P2 107 aa16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 MLNP12872 115 aa16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 GDF1P27539 372 aa16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 OPRM1P35372 400 aa16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 KCNJ1P48048 391 aa16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 ZNF136P52737 540 aa16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 ASPHQ12797 758 aa16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 PDAP1Q13442 181 aaKnown RBP16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 SERTAD2Q14140 314 aa16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 TRIP13Q15645 432 aaPredicted RBP16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 MPEG1Q2M385 716 aa16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 PRAMEF20Q5VT98 475 aa16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 TRIM40Q6P9F5 258 aa16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 CAPN12Q6ZSI9 719 aa16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 CAND1Q86VP6 1230 aaKnown RBP16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 LRRC75A-AS1Q8N1F1 130 aa16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 ZNF321PQ8N8H1 164 aa16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 ZNF592Q92610 1267 aa16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 PIGTQ969N2 578 aa16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 KIAA1191Q96A73 305 aa16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 MS4A6EQ96DS6 147 aa16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 Q96MF0 132 aa16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 XAB2Q9HCS7 855 aaKnown RBP16.4■□□□□ 0.22
TSPAN3-204ENST00000558394 INAFM1C9JVW0 142 aa16.39■□□□□ 0.21
TSPAN3-204ENST00000558394 ZNF354AO60765 605 aaPredicted RBP16.39■□□□□ 0.21
TSPAN3-204ENST00000558394 COX7A2P14406 83 aa16.39■□□□□ 0.21
TSPAN3-204ENST00000558394 CTSSP25774 331 aa16.39■□□□□ 0.21
TSPAN3-204ENST00000558394 AGFG1P52594 562 aaKnown RBP16.39■□□□□ 0.21
TSPAN3-204ENST00000558394 PLA2G16P53816 162 aa16.39■□□□□ 0.21
TSPAN3-204ENST00000558394 GPS1Q13098 491 aa16.39■□□□□ 0.21
TSPAN3-204ENST00000558394 DUSP8Q13202 625 aa16.39■□□□□ 0.21
TSPAN3-204ENST00000558394 PIGGQ5H8A4 983 aa16.39■□□□□ 0.21
TSPAN3-204ENST00000558394 CXorf67Q86X51 503 aaPredicted RBP16.39■□□□□ 0.21
TSPAN3-204ENST00000558394 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.39■□□□□ 0.21
TSPAN3-204ENST00000558394 CIARTQ8N365 385 aaPredicted RBP16.39■□□□□ 0.21
TSPAN3-204ENST00000558394 LRRC25Q8N386 305 aaPredicted RBP16.39■□□□□ 0.21
TSPAN3-204ENST00000558394 FAM13CQ8NE31 585 aa16.39■□□□□ 0.21
TSPAN3-204ENST00000558394 PAQR8Q8TEZ7 354 aa16.39■□□□□ 0.21
TSPAN3-204ENST00000558394 DACH2Q96NX9 599 aa16.39■□□□□ 0.21
TSPAN3-204ENST00000558394 SERINC2Q96SA4 455 aa16.39■□□□□ 0.21
TSPAN3-204ENST00000558394 CNIH4Q9P003 139 aa16.39■□□□□ 0.21
TSPAN3-204ENST00000558394 CAMK2AQ9UQM7 478 aa16.39■□□□□ 0.21
TSPAN3-204ENST00000558394 SLC22A14Q9Y267 594 aa16.39■□□□□ 0.21
TSPAN3-204ENST00000558394 LRIT2A6NDA9 550 aa16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 GOLGA8MH3BSY2 632 aa16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 DYRK3O43781 588 aa16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 ERN1O75460 977 aaKnown RBP16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 TRAPPC6AO75865 159 aa16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 PTMSP20962 102 aa16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 HNRNPH1P31943 449 aaKnown RBP16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 CPA2P48052 419 aa16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 MTTPP55157 894 aa16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 LIM2P55344 173 aa16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 TGM3Q08188 693 aa16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 NSUN5P2Q63ZY6 315 aa16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 POMZP3Q6PJE2 187 aa16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 TMIGD1Q6UXZ0 262 aa16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 DND1Q8IYX4 353 aaKnown RBP16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 KRT78Q8N1N4 520 aa16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 RASGEF1CQ8N431 466 aa16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 RNF10Q8N5U6 811 aaKnown RBP16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 C7orf57Q8NEG2 295 aa16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 NUBPLQ8TB37 319 aa16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 SMPDL3BQ92485 455 aa16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 ISL2Q96A47 359 aa16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 SPACA9Q96E40 222 aaPredicted RBP16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 TRIB1Q96RU8 372 aa16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 CSF3RQ99062 836 aa16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 DOHHQ9BU89 302 aa16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 REXO4Q9GZR2 422 aaKnown RBP16.38■□□□□ 0.21
TSPAN3-204ENST00000558394 AICDAQ9GZX7 198 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms