RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 SLC15A4Q8N697 577 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 CCDC89Q8N998 374 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 TC2NQ8N9U0 490 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 NAXEQ8NCW5 288 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 OR14A16Q8NHC5 309 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 GABPB2Q8TAK5 448 aaPredicted RBP4.77□□□□□ -1.65
SPG11-208ENST00000558155 ALG3Q92685 438 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 ANP32BQ92688 251 aaKnown RBP4.77□□□□□ -1.65
SPG11-208ENST00000558155 KCNJ9Q92806 393 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 KIAA1191Q96A73 305 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 JSRP1Q96MG2 331 aaPredicted RBP4.77□□□□□ -1.65
SPG11-208ENST00000558155 SLC30A3Q99726 388 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 TIMP4Q99727 224 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 CCL19Q99731 98 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 AIF1LQ9BQI0 150 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 RBM24Q9BX46 236 aaKnown RBP4.77□□□□□ -1.65
SPG11-208ENST00000558155 SGPP1Q9BX95 441 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 ALOXE3Q9BYJ1 711 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 OR8D2Q9GZM6 311 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 RBSNQ9H1K0 784 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 KLHL31Q9H511 634 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 CALHM2Q9HA72 323 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 SEMA4BQ9NPR2 832 aaPredicted RBP4.77□□□□□ -1.65
SPG11-208ENST00000558155 EIF2B3Q9NR50 452 aaKnown RBP4.77□□□□□ -1.65
SPG11-208ENST00000558155 CNIH4Q9P003 139 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 JKAMPQ9P055 326 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 VTI1BQ9UEU0 232 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 SOX13Q9UN79 622 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 SH2B3Q9UQQ2 575 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 PDE10AQ9Y233 779 aa4.77□□□□□ -1.65
SPG11-208ENST00000558155 MBD3L4A6NDZ8 208 aaPredicted RBP4.76□□□□□ -1.65
SPG11-208ENST00000558155 MBD3L5A6NJ08 208 aaPredicted RBP4.76□□□□□ -1.65
SPG11-208ENST00000558155 COL6A5A8TX70 2615 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 MIF4GDA9UHW6 222 aaKnown RBP4.76□□□□□ -1.65
SPG11-208ENST00000558155 C17orf105B2RV13 164 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 LIASO43766 372 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 B3GALT2O43825 422 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 NRDCO43847 1150 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 TRAPPC6AO75865 159 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 IPO7O95373 1038 aaKnown RBP4.76□□□□□ -1.65
SPG11-208ENST00000558155 C1QAP02745 245 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 RFPL3SP0C7P2 107 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 TMIGD3P0DMS9 266 aaPredicted RBP4.76□□□□□ -1.65
SPG11-208ENST00000558155 CCL3P10147 92 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 SAT1P21673 171 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 MGAT1P26572 445 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 GDF1P27539 372 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 ARNTP27540 789 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 SERPINB3P29508 390 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 PPP2R1BP30154 601 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 HPDP32754 393 aaPredicted RBP4.76□□□□□ -1.65
SPG11-208ENST00000558155 CPA2P48052 419 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 DIO3P55073 304 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 RAB38P57729 211 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 SARNPP82979 210 aaKnown RBP4.76□□□□□ -1.65
SPG11-208ENST00000558155 CCZ1BP86790 482 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 CCZ1P86791 482 aaPredicted RBP4.76□□□□□ -1.65
SPG11-208ENST00000558155 CDK16Q00536 496 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 DUSP8Q13202 625 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 BIKQ13323 160 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 CTBP1Q13363 440 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 RUNX2Q13950 521 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 SERTAD2Q14140 314 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 RCAN2Q14206 197 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 EFTUD2Q15029 972 aaKnown RBP eCLIP4.76□□□□□ -1.65
SPG11-208ENST00000558155 RBBP5Q15291 538 aaKnown RBP4.76□□□□□ -1.65
SPG11-208ENST00000558155 OASLQ15646 514 aaKnown RBP4.76□□□□□ -1.65
SPG11-208ENST00000558155 ZNF791Q3KP31 576 aaPredicted RBP4.76□□□□□ -1.65
SPG11-208ENST00000558155 TOR1AIP1Q5JTV8 583 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 DESI1Q6ICB0 168 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 HEPHL1Q6MZM0 1159 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 SCIMPQ6UWF3 145 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 LYPD8Q6UX82 237 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 C20orf204Q6ZNR8 217 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 PIWIL4Q7Z3Z4 852 aaKnown RBP4.76□□□□□ -1.65
SPG11-208ENST00000558155 HEATR5AQ86XA9 2040 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 PHC2Q8IXK0 858 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.76□□□□□ -1.65
SPG11-208ENST00000558155 CPNE9Q8IYJ1 553 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 SYCE1Q8N0S2 351 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 MYO1HQ8N1T3 1032 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 LRRC25Q8N386 305 aaPredicted RBP4.76□□□□□ -1.65
SPG11-208ENST00000558155 OR56A3Q8NH54 315 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 GIMAP7Q8NHV1 300 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 SLC22A8Q8TCC7 542 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 CALML6Q8TD86 181 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 PAQR8Q8TEZ7 354 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 PTPMT1Q8WUK0 201 aaPredicted RBP4.76□□□□□ -1.65
SPG11-208ENST00000558155 EEF1AKMT1Q8WVE0 214 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 SLC5A11Q8WWX8 675 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 ATL1Q8WXF7 558 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 NTNG2Q96CW9 530 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 PERPQ96FX8 193 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 ZFP3Q96NJ6 502 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 TRIB1Q96RU8 372 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 GPR21Q99679 349 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 SLC6A15Q9H2J7 730 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 PIGMQ9H3S5 423 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 ZNF703Q9H7S9 590 aaPredicted RBP4.76□□□□□ -1.65
SPG11-208ENST00000558155 ARL15Q9NXU5 204 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms