RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 FZD5Q13467 585 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 KIR2DS5Q14953 304 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 NKG7Q16617 165 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 NRF1Q16656 503 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 C6orf52Q5T4I8 152 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 TRIM40Q6P9F5 258 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 ENPP6Q6UWR7 440 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 CBLL1Q75N03 491 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 EIF3MQ7L2H7 374 aaKnown RBP7.88□□□□□ -1.15
ATXN3-235ENST00000556082 PAQR7Q86WK9 346 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.88□□□□□ -1.15
ATXN3-235ENST00000556082 GJD3Q8N144 294 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 C11orf65Q8NCR3 313 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 CDC26Q8NHZ8 85 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 FLVCR1-AS1Q8TAF5 88 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 FBXO30Q8TB52 745 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 NCLNQ969V3 563 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 TSACCQ96A04 125 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-235ENST00000556082 NRBF2Q96F24 287 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 SLC47A1Q96FL8 570 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 TOE1Q96GM8 510 aaKnown RBP7.88□□□□□ -1.15
ATXN3-235ENST00000556082 NRTNQ99748 197 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 KRTAP4-12Q9BQ66 201 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 DPH7Q9BTV6 452 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 TMPRSS13Q9BYE2 586 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 GSDMCQ9BYG8 508 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 ASPSCR1Q9BZE9 553 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 FAM192AQ9GZU8 254 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 TMEM168Q9H0V1 697 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 SRMSQ9H3Y6 488 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 LMAN1LQ9HAT1 526 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 IL1RAPQ9NPH3 570 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 CD93Q9NPY3 652 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 MIEF1Q9NQG6 463 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 PRDM7Q9NQW5 492 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 C1GALT1Q9NS00 363 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 SMPD3Q9NY59 655 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-235ENST00000556082 SPHK1Q9NYA1 384 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 USE1Q9NZ43 259 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 DLGAP2Q9P1A6 1054 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 TAAR2Q9P1P5 351 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 WNT16Q9UBV4 365 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 DUSP12Q9UNI6 340 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 CA5BQ9Y2D0 317 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 ENTPD2Q9Y5L3 495 aa7.88□□□□□ -1.15
ATXN3-235ENST00000556082 PCM1Q15154 2024 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 SPTY2D1-AS1A0A0U1RR47 76 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 A0A1W2PPC4 97 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 FEZF1A0PJY2 475 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 OR2A25A4D2G3 310 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 SAC3D1A6NKF1 404 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 G3V2T6 193 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 VILLO15195 856 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 TMPRSS11DO60235 418 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 TNFAIP8O95379 198 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 GBAP04062 536 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 ALPLP05186 524 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 CD72P21854 359 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 AK4P27144 223 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-235ENST00000556082 ACTR1BP42025 376 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 BLKP51451 505 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 ALDH3A2P51648 485 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 ARSFP54793 590 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 STARD6P59095 220 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 ACTR1AP61163 376 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 RPS15AP62244 130 aaKnown RBP7.87□□□□□ -1.15
ATXN3-235ENST00000556082 UBE2IP63279 158 aaKnown RBP7.87□□□□□ -1.15
ATXN3-235ENST00000556082 EEF1A2Q05639 463 aaKnown RBP7.87□□□□□ -1.15
ATXN3-235ENST00000556082 MERTKQ12866 999 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 EPS8Q12929 822 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 EIF2B5Q13144 721 aaKnown RBP7.87□□□□□ -1.15
ATXN3-235ENST00000556082 GAB1Q13480 694 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 DAG1Q14118 895 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 SIM2Q14190 667 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-235ENST00000556082 PRSS53Q2L4Q9 553 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 ZNF630Q2M218 657 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-235ENST00000556082 SLC36A3Q495N2 470 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 ZC3H12BQ5HYM0 836 aaKnown RBP7.87□□□□□ -1.15
ATXN3-235ENST00000556082 EXOSC6Q5RKV6 272 aaKnown RBP7.87□□□□□ -1.15
ATXN3-235ENST00000556082 MANEAQ5SRI9 462 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 KIAA1614Q5VZ46 1190 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 MRM1Q6IN84 353 aaKnown RBP7.87□□□□□ -1.15
ATXN3-235ENST00000556082 ABHD17CQ6PCB6 329 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 USP51Q70EK9 711 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 RD3Q7Z3Z2 195 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 RBM12BQ8IXT5 1001 aaKnown RBP7.87□□□□□ -1.15
ATXN3-235ENST00000556082 ST13P4Q8IZP2 240 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-235ENST00000556082 NAGSQ8N159 534 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 FAM86B1Q8N7N1 296 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 TSTD1Q8NFU3 115 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 PJA1Q8NG27 643 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 OR2L5Q8NG80 312 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 OR4E2Q8NGC2 313 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 CCL4L1Q8NHW4 92 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 ZFP28Q8NHY6 868 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 NT5CQ8TCD5 201 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 TMBIM1Q969X1 311 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 CIDECQ96AQ7 238 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-235ENST00000556082 MS4A6EQ96DS6 147 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 TM4SF19Q96DZ7 209 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms