RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 PRSS44E7EML9 344 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 KLRC4-KLRK1H3BQV0 150 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 PEX1O43933 1283 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 CTAGE8P0CG41 777 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 TNNI3P19429 210 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 PIK3CGP48736 1102 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 SERPINB9P50453 376 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 RPS13P62277 151 aaKnown RBP12.84□□□□□ -0.35
PCNX4-209ENST00000555569 ID2Q02363 134 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 SLAMF1Q13291 335 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 RNFT1Q5M7Z0 435 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 METTL2BQ6P1Q9 378 aaKnown RBP12.84□□□□□ -0.35
PCNX4-209ENST00000555569 RPTNQ6XPR3 784 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 C16orf47Q6ZP98 133 aaPredicted RBP12.84□□□□□ -0.35
PCNX4-209ENST00000555569 TAOK1Q7L7X3 1001 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 GOLGA7Q7Z5G4 137 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 SULF2Q8IWU5 870 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 CTAGE4Q8IX94 777 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 PLD6Q8N2A8 252 aaKnown RBP12.84□□□□□ -0.35
PCNX4-209ENST00000555569 ZNF808Q8N4W9 903 aaPredicted RBP12.84□□□□□ -0.35
PCNX4-209ENST00000555569 C7orf57Q8NEG2 295 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 ASB15Q8WXK1 588 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 ISL2Q96A47 359 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 ANKRD9Q96BM1 317 aaPredicted RBP12.84□□□□□ -0.35
PCNX4-209ENST00000555569 REPS1Q96D71 796 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 PAFAH2Q99487 392 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 MTERF1Q99551 399 aaKnown RBP12.84□□□□□ -0.35
PCNX4-209ENST00000555569 OR8D2Q9GZM6 311 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 IPPKQ9H8X2 491 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 LIN28AQ9H9Z2 209 aaKnown RBP12.84□□□□□ -0.35
PCNX4-209ENST00000555569 TIMMDC1Q9NPL8 285 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 ZNF358Q9NW07 568 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 MYOTQ9UBF9 498 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 TINAGQ9UJW2 476 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 ERVK-11Q9UQG0 969 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 IKBKGQ9Y6K9 419 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 CELSR2Q9HCU4 2923 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 ZNF407Q9C0G0 2248 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 CREBBPQ92793 2442 aa12.83□□□□□ -0.35
PCNX4-209ENST00000555569 TMEM200CA6NKL6 621 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 A8MVJ9 347 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 H0YIV9 168 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 PLPP1O14494 284 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 FGF17O60258 216 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 OR2J2O76002 312 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 SIX3O95343 332 aaPredicted RBP12.83□□□□□ -0.36
PCNX4-209ENST00000555569 RBP1P09455 135 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 ESRRAP11474 423 aaPredicted RBP12.83□□□□□ -0.36
PCNX4-209ENST00000555569 ABOP16442 354 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 PTX3P26022 381 aaPredicted RBP12.83□□□□□ -0.36
PCNX4-209ENST00000555569 MAGEA12P43365 314 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 HK2P52789 917 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 ARFIP1P53367 373 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 IGLV3-21P80748 117 aaPredicted RBP12.83□□□□□ -0.36
PCNX4-209ENST00000555569 ART3Q13508 389 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 CPSF6Q16630 551 aaKnown RBP eCLIP12.83□□□□□ -0.36
PCNX4-209ENST00000555569 GLE1Q53GS7 698 aaKnown RBP12.83□□□□□ -0.36
PCNX4-209ENST00000555569 MDGA2Q7Z553 956 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 MRGPRGQ86SM5 289 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 GPR180Q86V85 440 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 GPALPP1Q8IXQ4 340 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 ZCCHC7Q8N3Z6 543 aaKnown RBP12.83□□□□□ -0.36
PCNX4-209ENST00000555569 ZNF321PQ8N8H1 164 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 PTGR2Q8N8N7 351 aaPredicted RBP12.83□□□□□ -0.36
PCNX4-209ENST00000555569 L3MBTL4Q8NA19 623 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 SLC2A12Q8TD20 617 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 SREK1Q8WXA9 508 aaKnown RBP12.83□□□□□ -0.36
PCNX4-209ENST00000555569 SCYL1Q96KG9 808 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 RPF2Q9H7B2 306 aaKnown RBP12.83□□□□□ -0.36
PCNX4-209ENST00000555569 HPF1Q9NWY4 346 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 MS4A12Q9NXJ0 267 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 PHF11Q9UIL8 331 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 ENTPD4Q9Y227 616 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 RNF11Q9Y3C5 154 aa12.83□□□□□ -0.36
PCNX4-209ENST00000555569 PKDREJQ9NTG1 2253 aa12.82□□□□□ -0.36
PCNX4-209ENST00000555569 POC1B-GALNT4F8VUJ3 575 aa12.82□□□□□ -0.36
PCNX4-209ENST00000555569 WWP2O00308 870 aa12.82□□□□□ -0.36
PCNX4-209ENST00000555569 TFECO14948 347 aaPredicted RBP12.82□□□□□ -0.36
PCNX4-209ENST00000555569 KRT38O76015 456 aa12.82□□□□□ -0.36
PCNX4-209ENST00000555569 ETHE1O95571 254 aa12.82□□□□□ -0.36
PCNX4-209ENST00000555569 TUBB4AP04350 444 aa12.82□□□□□ -0.36
PCNX4-209ENST00000555569 COX7A2P14406 83 aa12.82□□□□□ -0.36
PCNX4-209ENST00000555569 ECHS1P30084 290 aa12.82□□□□□ -0.36
PCNX4-209ENST00000555569 TLX1P31314 330 aaPredicted RBP12.82□□□□□ -0.36
PCNX4-209ENST00000555569 RFC3P40938 356 aa12.82□□□□□ -0.36
PCNX4-209ENST00000555569 SOX3P41225 446 aa12.82□□□□□ -0.36
PCNX4-209ENST00000555569 STT3AP46977 705 aa12.82□□□□□ -0.36
PCNX4-209ENST00000555569 HNRNPH2P55795 449 aaKnown RBP12.82□□□□□ -0.36
PCNX4-209ENST00000555569 GPR85P60893 370 aa12.82□□□□□ -0.36
PCNX4-209ENST00000555569 RNF4P78317 190 aa12.82□□□□□ -0.36
PCNX4-209ENST00000555569 HSF1Q00613 529 aa12.82□□□□□ -0.36
PCNX4-209ENST00000555569 TNFRSF17Q02223 184 aa12.82□□□□□ -0.36
PCNX4-209ENST00000555569 BIKQ13323 160 aa12.82□□□□□ -0.36
PCNX4-209ENST00000555569 TSNAXIP1Q2TAA8 658 aa12.82□□□□□ -0.36
PCNX4-209ENST00000555569 C18orf63Q68DL7 685 aa12.82□□□□□ -0.36
PCNX4-209ENST00000555569 SP5Q6BEB4 398 aaPredicted RBP12.82□□□□□ -0.36
PCNX4-209ENST00000555569 IL20RBQ6UXL0 311 aa12.82□□□□□ -0.36
PCNX4-209ENST00000555569 BNC2Q6ZN30 1099 aaPredicted RBP12.82□□□□□ -0.36
PCNX4-209ENST00000555569 CHERPQ8IWX8 916 aaKnown RBP12.82□□□□□ -0.36
PCNX4-209ENST00000555569 OR4N5Q8IXE1 308 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms