RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	PDGFB	P01127	241 aa	Predicted RBP	3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	RPLP0	P05388	317 aa	Known RBP	3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	LYN	P07948	512 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	DES	P17661	470 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	AKT2	P31751	481 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	OPRL1	P41146	370 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	FHIT	P49789	147 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	CCL11	P51671	97 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	EXOSC7	Q15024	291 aa	Known RBP	3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	KARS	Q15046	597 aa	Known RBP	3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	CARTPT	Q16568	116 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	WSCD2	Q2TBF2	565 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	HLA-B	Q31612	363 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	GPAT3	Q53EU6	434 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	HIST2H2AA3	Q6FI13	130 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506		Q6ZRP5	223 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	CDHR3	Q6ZTQ4	885 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506		Q71RC1	249 aa	Predicted RBP	3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	ZER1	Q7Z7L7	766 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	CATSPERD	Q86XM0	798 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	KRT12	Q99456	494 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	ASCL2	Q99929	193 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	OVOL2	Q9BRP0	275 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	MED17	Q9NVC6	651 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	KLHL8	Q9P2G9	620 aa	Predicted RBP	3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	KLK11	Q9UBX7	282 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	PLA2G4C	Q9UP65	541 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	FGD5	Q6ZNL6	1462 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	NPC1L1	Q9UHC9	1359 aa		3.74	□□□□□ -1.81
KTN1-222	ENST00000555506	RGSL1	A5PLK6	1076 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	SHISA7	A6NL88	538 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	TLX2	O43763	284 aa	Predicted RBP	3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	KRT86	O43790	486 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	SOCS5	O75159	536 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	CSDE1	O75534	798 aa	Known RBP	3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	NXPH2	O95156	264 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	PTBP3	O95758	552 aa	Known RBP	3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	CLDN1	O95832	211 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	CALCA	P01258	141 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	APRT	P07741	180 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	SP1	P08047	785 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	CCND2	P30279	289 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	CHRNA3	P32297	505 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	MMP12	P39900	470 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	HYAL1	Q12794	435 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	KRT81	Q14533	505 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	RFTN2	Q52LD8	501 aa	Predicted RBP	3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	FASTKD1	Q53R41	847 aa	Known RBP	3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	CMPK2	Q5EBM0	449 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	C1orf189	Q5VU69	101 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	CES4A	Q5XG92	561 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	RTL6	Q6ICC9	239 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	OLFM4	Q6UX06	510 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	NOTCH2NL	Q7Z3S9	236 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	WDR49	Q8IV35	697 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	KLHDC8B	Q8IXV7	354 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	OR9Q2	Q8NGE9	314 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	U2AF1L4	Q8WU68	220 aa	Known RBP	3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	FBXO17	Q96EF6	278 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	PCED1B	Q96HM7	432 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	RAB17	Q9H0T7	212 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	UBE2T	Q9NPD8	197 aa	Predicted RBP	3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	NGB	Q9NPG2	151 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	PLCXD1	Q9NUJ7	323 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	SOHLH2	Q9NX45	425 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	CNOT2	Q9NZN8	540 aa	Known RBP	3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	VPS54	Q9P1Q0	977 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	TMEM181	Q9P2C4	612 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	DIMT1	Q9UNQ2	313 aa	Known RBP	3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	MRPS28	Q9Y2Q9	187 aa	Known RBP	3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	ZHX2	Q9Y6X8	837 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	FAM205A	Q6ZU69	1335 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	IQCM	A0A1B0GVH7	501 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	TMEM89	A2RUT3	159 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	YJEFN3	A6XGL0	299 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506		A8MU76	341 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	KPNA7	A9QM74	516 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	MTRF1	O75570	445 aa	Known RBP	3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	SYNGR4	O95473	234 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	DNAJB1	P25685	340 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	HPD	P32754	393 aa	Predicted RBP	3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	NUMB	P49757	651 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	LIMK2	P53671	638 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	NLRP11	P59045	1033 aa	Known RBP	3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	POLR2F	P61218	127 aa	Known RBP	3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	CYCS	P99999	105 aa	Known RBP	3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	TRADD	Q15628	312 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	WLS	Q5T9L3	541 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	RAET1G	Q6H3X3	334 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	IRGC	Q6NXR0	463 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	CDC42EP5	Q6NZY7	148 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	FAM159A	Q6UWV7	190 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	BNIPL	Q7Z465	357 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	ADGRD2	Q7Z7M1	963 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	PARP8	Q8N3A8	854 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	ADAD2	Q8NCV1	583 aa	Known RBP	3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	OR56B1	Q8NGI3	324 aa		3.73	□□□□□ -1.81
KTN1-222	ENST00000555506	GOLGA5	Q8TBA6	731 aa		3.73	□□□□□ -1.81

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