RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 CROCCP2Q86T23 111 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 ATCAYQ86WG3 371 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 TMEM132CQ8N3T6 1108 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 TMEM52Q8NDY8 209 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 OR14A16Q8NHC5 309 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 TANKQ92844 425 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 DAZLQ92904 295 aaKnown RBP11.33□□□□□ -0.6
SRP54-206ENST00000555317 ALOXE3Q9BYJ1 711 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 DEFB126Q9BYW3 111 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 RPF2Q9H7B2 306 aaKnown RBP11.33□□□□□ -0.6
SRP54-206ENST00000555317 DDX31Q9H8H2 851 aaKnown RBP11.33□□□□□ -0.6
SRP54-206ENST00000555317 OXSMQ9NWU1 459 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 STMN3Q9NZ72 180 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 KCMF1Q9P0J7 381 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 ADAM29Q9UKF5 820 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 A0A0A6YYD5 115 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 TRAV17A0A0B4J275 112 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 A0A1B0GTL3 188 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 PYCARD-AS1I3L0S3 204 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 LDB3O75112 727 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 GUCY1B2O75343 617 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 SPAG7O75391 227 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 EEDO75530 441 aaKnown RBP11.32□□□□□ -0.6
SRP54-206ENST00000555317 SORBS2O94875 1100 aaKnown RBP11.32□□□□□ -0.6
SRP54-206ENST00000555317 ESRRBO95718 433 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 GBAP04062 536 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 KLK1P06870 262 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 MYZAPP0CAP1 466 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 BSGP35613 385 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 CLCN2P51788 898 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 MAPK12P53778 367 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 PLIN5Q00G26 463 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 BIKQ13323 160 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 PLEKHN1Q494U1 663 aaPredicted RBP11.32□□□□□ -0.6
SRP54-206ENST00000555317 ACER2Q5QJU3 275 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 B3GNTL1Q67FW5 361 aaPredicted RBP11.32□□□□□ -0.6
SRP54-206ENST00000555317 FCRLBQ6BAA4 426 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 Q6ZS92 163 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 FRMD7Q6ZUT3 714 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 GBP7Q8N8V2 638 aaPredicted RBP11.32□□□□□ -0.6
SRP54-206ENST00000555317 BANPQ8N9N5 519 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 B3GNT7Q8NFL0 401 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 PSMF1Q92530 271 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 VMP1Q96GC9 406 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 DGAT2Q96PD7 388 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 FAM111AQ96PZ2 611 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 TMEM109Q9BVC6 243 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 MRPL1Q9BYD6 325 aaKnown RBP11.32□□□□□ -0.6
SRP54-206ENST00000555317 RNF32Q9H0A6 362 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 C12orf65Q9H3J6 166 aaKnown RBP11.32□□□□□ -0.6
SRP54-206ENST00000555317 GSTO2Q9H4Y5 243 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 FARSBQ9NSD9 589 aaKnown RBP11.32□□□□□ -0.6
SRP54-206ENST00000555317 PLA2G3Q9NZ20 509 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 VPS29Q9UBQ0 182 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 COPS7AQ9UBW8 275 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 PLLPQ9Y342 182 aa11.32□□□□□ -0.6
SRP54-206ENST00000555317 LRRK2Q5S007 2527 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 TRBV11-1A0A0K0K1C0 115 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 C17orf105B2RV13 164 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 FCHO1O14526 889 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 PROM1O43490 865 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 TMPRSS11DO60235 418 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 OR10H2O60403 315 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 TRIM13O60858 407 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 VPS4BO75351 444 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 WDPCPO95876 746 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 F10P00742 488 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 HNRNPH2P55795 449 aaKnown RBP11.31□□□□□ -0.6
SRP54-206ENST00000555317 ID2Q02363 134 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 ZNF844Q08AG5 666 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 INPP5JQ15735 1006 aaPredicted RBP11.31□□□□□ -0.6
SRP54-206ENST00000555317 IMPG1Q17R60 797 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 CEP85LQ5SZL2 805 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 C6orf163Q5TEZ5 329 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 C18orf63Q68DL7 685 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 OR52E8Q6IFG1 317 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 COMMD6Q7Z4G1 85 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 CUZD1Q86UP6 607 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 CRLF3Q8IUI8 442 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 C10orf107Q8IVU9 208 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 LGI4Q8N135 537 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 BEST3Q8N1M1 668 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 METTL4Q8N3J2 472 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 KIF2BQ8N4N8 673 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 HORMAD2Q8N7B1 307 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 OR1N1Q8NGS0 311 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 ELP5Q8TE02 316 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 AGAP11Q8TF27 550 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 HAS2Q92819 552 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 NCLNQ969V3 563 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 RBM18Q96H35 190 aaKnown RBP11.31□□□□□ -0.6
SRP54-206ENST00000555317 HBEGFQ99075 208 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 UTP23Q9BRU9 249 aaKnown RBP11.31□□□□□ -0.6
SRP54-206ENST00000555317 PELOQ9BRX2 385 aaKnown RBP11.31□□□□□ -0.6
SRP54-206ENST00000555317 ZNF717Q9BY31 904 aaPredicted RBP11.31□□□□□ -0.6
SRP54-206ENST00000555317 STMN4Q9H169 189 aaPredicted RBP11.31□□□□□ -0.6
SRP54-206ENST00000555317 VTI1BQ9UEU0 232 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 ZNF225Q9UK10 706 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 VPS4AQ9UN37 437 aa11.31□□□□□ -0.6
SRP54-206ENST00000555317 ATG4BQ9Y4P1 393 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms