RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 KHDRBS2Q5VWX1 349 aaKnown RBP11.13□□□□□ -0.63
SHMT2-212ENST00000554467 USP51Q70EK9 711 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 FAM160A2Q8N612 972 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-212ENST00000554467 RLN3Q8WXF3 142 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 BARD1Q99728 777 aaKnown RBP11.13□□□□□ -0.63
SHMT2-212ENST00000554467 C1QTNF7Q9BXJ2 289 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 GPATCH2Q9NW75 528 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 SLCO1B1Q9Y6L6 691 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 SCN2AQ99250 2005 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 CCDC88CQ9P219 2028 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 SHISA7A6NL88 538 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 ALOX5P09917 674 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 BMP4P12644 408 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 JUNBP17275 347 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-212ENST00000554467 DRD1P21728 446 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 HTR1BP28222 390 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 ACTR1BP42025 376 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 PIK3CBP42338 1070 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 MAPK12P53778 367 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 ACTR1AP61163 376 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 ZNF33BQ06732 778 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 SLC13A2Q13183 592 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 SIGIRRQ6IA17 410 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 SLC38A6Q8IZM9 456 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 DEFB119Q8N690 84 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 VPS37AQ8NEZ2 397 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 RAB2BQ8WUD1 216 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 COQ8BQ96D53 544 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 SLC35A5Q9BS91 424 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 FUNDC2Q9BWH2 189 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 ZNF717Q9BY31 904 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-212ENST00000554467 LHX9Q9NQ69 397 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 TAAR2Q9P1P5 351 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 AASSQ9UDR5 926 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 C1orf226A1L170 272 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 MYO1GB0I1T2 1018 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 TMPRSS11DO60235 418 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 HS6ST1O60243 411 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 FKBP9O95302 570 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 CYP4B1P13584 511 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 PEBP1P30086 187 aaKnown RBP11.12□□□□□ -0.63
SHMT2-212ENST00000554467 PXNP49023 591 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-212ENST00000554467 MAPK11Q15759 364 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 FAM71E1Q6IPT2 247 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 FKBP9P1Q75LS8 142 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 GALNT5Q7Z7M9 940 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 EXOSC8Q96B26 276 aaKnown RBP11.12□□□□□ -0.63
SHMT2-212ENST00000554467 OR2M4Q96R27 311 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 TIMM29Q9BSF4 260 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 MS4A8Q9BY19 250 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 AICDAQ9GZX7 198 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 TCEAL2Q9H3H9 227 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-212ENST00000554467 C6orf106Q9H6K1 298 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-212ENST00000554467 SLAMF7Q9NQ25 335 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 TEX10Q9NXF1 929 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-212ENST00000554467 CYP8B1Q9UNU6 501 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 DNMT3AQ9Y6K1 912 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-212ENST00000554467 ISM1B1AKI9 464 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 C4orf51C9J302 202 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 HAT1O14929 419 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 KCNK2O95069 426 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 HTR1AP08908 422 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 ALPPL2P10696 532 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 PRKCAP17252 672 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 LSM3P62310 102 aaKnown RBP11.12□□□□□ -0.63
SHMT2-212ENST00000554467 RGNQ15493 299 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 CTF1Q16619 201 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 IRAK1BP1Q5VVH5 260 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 SZRD1Q7Z422 152 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 RNF130Q86XS8 419 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 ZDHHC13Q8IUH4 622 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 FAM3CQ92520 227 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 PYURFQ96I23 114 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 DPH7Q9BTV6 452 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 MARCH7Q9H992 704 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 SLC6A20Q9NP91 592 aa11.12□□□□□ -0.63
SHMT2-212ENST00000554467 G3V2T6 193 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 GPX2P18283 190 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 BCL6P41182 706 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 CLK3P49761 638 aaKnown RBP11.11□□□□□ -0.63
SHMT2-212ENST00000554467 ARSFP54793 590 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 PRDX1Q06830 199 aaKnown RBP11.11□□□□□ -0.63
SHMT2-212ENST00000554467 ARHGAP19Q14CB8 494 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 SLC5A12Q1EHB4 618 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 ZNF773Q6PK81 442 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 UBE3DQ7Z6J8 389 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 ZNF761Q86XN6 746 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-212ENST00000554467 ZDHHC21Q8IVQ6 265 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 SLC44A2Q8IWA5 706 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-212ENST00000554467 UBE2E3Q969T4 207 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 OTUB1Q96FW1 271 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-212ENST00000554467 NECTIN4Q96NY8 510 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 EPS8L2Q9H6S3 715 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 MRPS30Q9NP92 439 aaKnown RBP11.11□□□□□ -0.63
SHMT2-212ENST00000554467 N6AMT1Q9Y5N5 214 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 CELA2BP08218 269 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-212ENST00000554467 SPNP16150 400 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 PKLRP30613 574 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 SHMT2P34897 504 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 BSGP35613 385 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms