RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 RFWD2Q8NHY2 731 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 METTL6Q8TCB7 284 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 MMABQ96EY8 250 aaPredicted RBP13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 NT5DC2Q9H857 520 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 KCNK13Q9HB14 408 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 FARSBQ9NSD9 589 aaKnown RBP13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 C14orf105Q9NVL8 296 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 RUVBL1Q9Y265 456 aaKnown RBP13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 FIS1Q9Y3D6 152 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 PTGDR2Q9Y5Y4 395 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 USH1CQ9Y6N9 552 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 SVILO95425 2214 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 APCP25054 2843 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 OTOGQ6ZRI0 2925 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 TRBC2A0A5B9 178 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 FEZF1A0PJY2 475 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 HDAC3O15379 428 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 TBX6O95947 436 aaPredicted RBP13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 ITGAMP11215 1152 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 ARL1P40616 181 aaPredicted RBP13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 BCL6P41182 706 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 SCTRP47872 440 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 HK2P52789 917 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 BTKQ06187 659 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 LAPTM5Q13571 262 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 NAA25Q14CX7 972 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 HKDC1Q2TB90 917 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 ABHD17BQ5VST6 288 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 FRG2Q64ET8 278 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 MED27Q6P2C8 311 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 MTFR2Q6P444 385 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 SCIMPQ6UWF3 145 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 BNC2Q6ZN30 1099 aaPredicted RBP13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 RIPOR1Q6ZS17 1223 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 MYLK4Q86YV6 388 aaPredicted RBP13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 PLD3Q8IV08 490 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 RNF175Q8N4F7 328 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 ZNF808Q8N4W9 903 aaPredicted RBP13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 CSNK1A1LQ8N752 337 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 AMER2Q8N7J2 671 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 OR7G3Q8NG95 312 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 TWIST2Q8WVJ9 160 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 MVB12AQ96EY5 273 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 THOC1Q96FV9 657 aaKnown RBP13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 C3orf30Q96M34 536 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 FRG2BQ96QU4 278 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 AIF1LQ9BQI0 150 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 PITHD1Q9GZP4 211 aaPredicted RBP13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 RHBGQ9H310 441 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 RABEP2Q9H5N1 569 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 NPHS2Q9NP85 383 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 CHST11Q9NPF2 352 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 ABI3Q9P2A4 366 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 MKL2Q9ULH7 1088 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 TSC22D4Q9Y3Q8 395 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 CCL27Q9Y4X3 112 aa13.17□□□□□ -0.3
SPTLC2-202ENST00000554365 CNTRLQ7Z7A1 2325 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 A0A0A6YYC8 382 aaPredicted RBP13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 SERTM1A2A2V5 107 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 OR5H15A6NDH6 313 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 I3L1I5 382 aaPredicted RBP13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 SDHDO14521 159 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 PIP5K1BO14986 540 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 PRAMEF2O60811 474 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 SKAP2O75563 359 aaPredicted RBP13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 PDYNP01213 254 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 HMOX2P30519 316 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 PTGER4P35408 488 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 CA7P43166 264 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 NEK2P51955 445 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 CBX1P83916 185 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 PMP22Q01453 160 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 RELAQ04206 551 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 RBPJQ06330 500 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 ZNF33BQ06732 778 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 ABRAXAS2Q15018 415 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 PCOLCEQ15113 449 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 PDCD2Q16342 344 aaPredicted RBP13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 SYT16Q17RD7 645 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 XKR7Q5GH72 579 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 PAGE2BQ5JRK9 111 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 TMIGD1Q6UXZ0 262 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 RPTNQ6XPR3 784 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 ADCK2Q7Z695 626 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 KIRREL3Q8IZU9 778 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 AMER3Q8N944 861 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 OR2T11Q8NH01 316 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 DNAJB8Q8NHS0 232 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 FAR2Q96K12 515 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 LURAP1Q96LR2 239 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 CCT8L2Q96SF2 557 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 NUF2Q9BZD4 464 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 ZNF700Q9H0M5 742 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 MEAF6Q9HAF1 191 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 MKKSQ9NPJ1 570 aaPredicted RBP13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 VTI1BQ9UEU0 232 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 ITGB1BP2Q9UKP3 347 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 PCDHGA11Q9Y5H2 935 aa13.16□□□□□ -0.3
SPTLC2-202ENST00000554365 A0A1W2PQ72 361 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms