RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 OTULINQ96BN8 352 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 MTFMTQ96DP5 389 aaKnown RBP9.14□□□□□ -0.95
SIX4-202ENST00000554079 TSPAN17Q96FV3 270 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 TMEM176AQ96HP8 235 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 TMEM41AQ96HV5 264 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 ZIC5Q96T25 663 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 EPYCQ99645 322 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 ALX4Q9H161 411 aaPredicted RBP9.14□□□□□ -0.95
SIX4-202ENST00000554079 COMMD3Q9UBI1 195 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 ZNF225Q9UK10 706 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 SAMD4AQ9UPU9 718 aaKnown RBP9.14□□□□□ -0.95
SIX4-202ENST00000554079 CHST2Q9Y4C5 530 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 DMRT1Q9Y5R6 373 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 LOC285556D6RIA3 1793 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 COL5A3P25940 1745 aaPredicted RBP9.13□□□□□ -0.95
SIX4-202ENST00000554079 TOXO94900 526 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 RECKO95980 971 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 URODP06132 367 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 G6PDP11413 515 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 DRD2P14416 443 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 CD1DP15813 335 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 DDX6P26196 483 aaKnown RBP eCLIP9.13□□□□□ -0.95
SIX4-202ENST00000554079 PRDX3P30048 256 aaKnown RBP9.13□□□□□ -0.95
SIX4-202ENST00000554079 IDH2P48735 452 aaKnown RBP9.13□□□□□ -0.95
SIX4-202ENST00000554079 CDKN2DP55273 166 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 BPIFB3P59826 476 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 SNRPEP62304 92 aaKnown RBP9.13□□□□□ -0.95
SIX4-202ENST00000554079 CRHR2Q13324 411 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 KCTD2Q14681 263 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 HLXQ14774 488 aaPredicted RBP9.13□□□□□ -0.95
SIX4-202ENST00000554079 SURF1Q15526 300 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 OR4D1Q15615 310 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 UGT8Q16880 541 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 DUOXA2Q1HG44 320 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 KLHL26Q53HC5 615 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 C22orf42Q6IC83 251 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 KIAA0930Q6ICG6 404 aaPredicted RBP9.13□□□□□ -0.95
SIX4-202ENST00000554079 CATSPERGQ6ZRH7 1159 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 CBLN2Q8IUK8 224 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 NAXDQ8IW45 347 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 PDZD9Q8IXQ8 264 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 ZFP82Q8N141 532 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 BPIFCQ8NFQ6 507 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 ELMOD3Q96FG2 381 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 SENP5Q96HI0 755 aaPredicted RBP9.13□□□□□ -0.95
SIX4-202ENST00000554079 FCRL1Q96LA6 429 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 MRPL45Q9BRJ2 306 aaKnown RBP9.13□□□□□ -0.95
SIX4-202ENST00000554079 YIPF4Q9BSR8 244 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 REEP1Q9H902 201 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 ZNF334Q9HCZ1 680 aaPredicted RBP9.13□□□□□ -0.95
SIX4-202ENST00000554079 EXOSC3Q9NQT5 275 aaKnown RBP9.13□□□□□ -0.95
SIX4-202ENST00000554079 LATS2Q9NRM7 1088 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 TREX1Q9NSU2 369 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 MPP6Q9NZW5 540 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 GHRLQ9UBU3 117 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 HCN2Q9UL51 889 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 DUSP12Q9UNI6 340 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 CLCA2Q9UQC9 943 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 NUBP2Q9Y5Y2 271 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 UBIAD1Q9Y5Z9 338 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 AP1M2Q9Y6Q5 423 aa9.13□□□□□ -0.95
SIX4-202ENST00000554079 POM121BA6NF01 834 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 C5orf52A6NGY3 159 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 OR6C75A6NL08 312 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 L7N2F9 121 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 HAS3O00219 553 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 DPM1O60762 260 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 CRCPO75575 148 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 RAD17O75943 681 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 ZNF682O95780 498 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 ALDOBP05062 364 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 CHRM5P08912 532 aaPredicted RBP9.12□□□□□ -0.95
SIX4-202ENST00000554079 COX5BP10606 129 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 TFPIP10646 304 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 UROSP10746 265 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 MYCLP12524 364 aaPredicted RBP9.12□□□□□ -0.95
SIX4-202ENST00000554079 NDUFB7P17568 137 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 AFF1P51825 1210 aaKnown RBP9.12□□□□□ -0.95
SIX4-202ENST00000554079 CTBP2P56545 445 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 TAS2R60P59551 318 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 MLLT11Q13015 90 aaPredicted RBP9.12□□□□□ -0.95
SIX4-202ENST00000554079 ILKQ13418 452 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 ALKBH1Q13686 389 aaKnown RBP9.12□□□□□ -0.95
SIX4-202ENST00000554079 NR6A1Q15406 480 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 SEC23BQ15437 767 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 TMEM44Q2T9K0 475 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 SYTL3Q4VX76 610 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 PRAMEF13Q5VWM6 474 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 MSANTD2Q6P1R3 559 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 Q6ZSR9 355 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 PUSL1Q8N0Z8 303 aaKnown RBP9.12□□□□□ -0.95
SIX4-202ENST00000554079 NANOGP1Q8N7R0 232 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 PLA2G15Q8NCC3 412 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 OR9Q1Q8NGQ5 310 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 OR14A16Q8NHC5 309 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 RNF139Q8WU17 664 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 FAM193BQ96PV7 902 aaPredicted RBP9.12□□□□□ -0.95
SIX4-202ENST00000554079 ATOH8Q96SQ7 321 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 TCEAL7Q9BRU2 100 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 TFB2MQ9H5Q4 396 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms