RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 NVLO15381 856 aaKnown RBP13.68□□□□□ -0.22
SHMT2-210ENST00000553950 STK17BO94768 372 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 SLITRK5O94991 958 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 BMP10O95393 424 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 TIAF1O95411 115 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 B3GALT4O96024 378 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 CCNYL3P0C7X3 344 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 XCR1P46094 333 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 RASSF2P50749 326 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 HSD17B7P56937 341 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 GABREP78334 506 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 OLR1P78380 273 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 UGT8Q16880 541 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 TIGD2Q4W5G0 525 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 SPANXN4Q5MJ08 99 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 FOXR1Q6PIV2 292 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 QSOX2Q6ZRP7 698 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 GK5Q6ZS86 529 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 CCDC121Q6ZUS5 278 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 SNX32Q86XE0 403 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 TICAM1Q8IUC6 712 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 ESX1Q8N693 406 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 METTL27Q8N6F8 245 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-210ENST00000553950 KRTCAP2Q8N6L1 136 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 FAM47BQ8NA70 645 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 GFM2Q969S9 779 aaKnown RBP13.68□□□□□ -0.22
SHMT2-210ENST00000553950 COQ8BQ96D53 544 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 NXPE2Q96DL1 559 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 PEX11GQ96HA9 241 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 DUSP26Q9BV47 211 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 TGIF2Q9GZN2 237 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 NRSN2Q9GZP1 204 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 SLC26A1Q9H2B4 701 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 WDR54Q9H977 334 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 SH3BP4Q9P0V3 963 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 IFT80Q9P2H3 777 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-210ENST00000553950 PADI2Q9Y2J8 665 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 B3GALT1Q9Y5Z6 326 aa13.68□□□□□ -0.22
SHMT2-210ENST00000553950 SDK2Q58EX2 2172 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 STMND1H3BQB6 276 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 AGRPO00253 132 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 CYR61O00622 381 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 TNFSF15O95150 251 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 DLGAP3O95886 979 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 ESRRAP11474 423 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-210ENST00000553950 COX4I1P13073 169 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 ITGAXP20702 1163 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 ETV5P41161 510 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 HNRNPFP52597 415 aaKnown RBP13.67□□□□□ -0.22
SHMT2-210ENST00000553950 CLDN6P56747 220 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 SERTAD2Q14140 314 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 MAPKAPK3Q16644 382 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 PGS1Q32NB8 556 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 C6orf163Q5TEZ5 329 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 C1orf189Q5VU69 101 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 ZNF385CQ66K41 422 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-210ENST00000553950 C6orf89Q6UWU4 347 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 OR4K14Q8NGD5 310 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 OR5T3Q8NGG3 340 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 ITCHQ96J02 903 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 OR52E6Q96RD3 313 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 CSF3RQ99062 836 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 YIPF2Q9BWQ6 316 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 SLC35C2Q9NQQ7 365 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 PRTFDC1Q9NRG1 225 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 ACSS1Q9NUB1 689 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-210ENST00000553950 PCDHGB4Q9UN71 923 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 MAU2Q9Y6X3 613 aa13.67□□□□□ -0.22
SHMT2-210ENST00000553950 WDR87Q6ZQQ6 2873 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 SCN2AQ99250 2005 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 DXOO77932 396 aaKnown RBP13.66□□□□□ -0.22
SHMT2-210ENST00000553950 NPPAP01160 153 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 NTRK1P04629 796 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 IFI6P09912 130 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 CSNK2A2P19784 350 aaPredicted RBP13.66□□□□□ -0.22
SHMT2-210ENST00000553950 IL12AP29459 219 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 MPIP34949 423 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 OR1D4P47884 311 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 PLIN5Q00G26 463 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 SLC13A2Q13183 592 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 MLC1Q15049 377 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 PRAMEF17Q5VTA0 474 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 C18orf63Q68DL7 685 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 C6orf15Q6UXA7 325 aaPredicted RBP13.66□□□□□ -0.22
SHMT2-210ENST00000553950 OVCH1Q7RTY7 1134 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 TREML1Q86YW5 311 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 FUNDC1Q8IVP5 155 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 ZC3H7AQ8IWR0 971 aaKnown RBP13.66□□□□□ -0.22
SHMT2-210ENST00000553950 LRRC25Q8N386 305 aaPredicted RBP13.66□□□□□ -0.22
SHMT2-210ENST00000553950 TRIML2Q8N7C3 387 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 OR7A2PQ8NGA2 310 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 DNAJB14Q8TBM8 379 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 MR1Q95460 341 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 EXOSC8Q96B26 276 aaKnown RBP13.66□□□□□ -0.22
SHMT2-210ENST00000553950 ROPN1LQ96C74 230 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 NSL1Q96IY1 281 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 TEX37Q96LM6 180 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 BBS4Q96RK4 519 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 EFCAB1Q9HAE3 211 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 THSD1Q9NS62 852 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms