RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 IDSB3KWA1 339 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 RRP8O43159 456 aaKnown RBP11.51□□□□□ -0.57
SHMT2-209ENST00000553949 PRMT3O60678 531 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 CTNSO60931 367 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 CREG1O75629 220 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 CYC1P08574 325 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 ALDOCP09972 364 aaKnown RBP11.51□□□□□ -0.57
SHMT2-209ENST00000553949 G6PDP11413 515 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 DRD2P14416 443 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 ASMTP46597 345 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 EFNA3P52797 238 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 DIO3P55073 304 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 HSD17B7P56937 341 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 BTG2P78543 158 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 FOXK2Q01167 660 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 MC1RQ01726 317 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 C2orf80Q0P641 193 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 SF3A3Q12874 501 aaKnown RBP eCLIP11.51□□□□□ -0.571e-13■■■□□ 16.4
SHMT2-209ENST00000553949 SLC13A2Q13183 592 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 HEPACAMQ14CZ8 416 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 OR52E8Q6IFG1 317 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 FAM71E1Q6IPT2 247 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 QSOX2Q6ZRP7 698 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 CLNKQ7Z7G1 428 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 PROSER1Q86XN7 944 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 SCUBE1Q8IWY4 988 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 SPACA3Q8IXA5 215 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 TMEM132CQ8N3T6 1108 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 PLPP5Q8NEB5 264 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 CLHC1Q8NHS4 586 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 ZCCHC14Q8WYQ9 949 aaKnown RBP11.51□□□□□ -0.57
SHMT2-209ENST00000553949 STARD8Q92502 1023 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 TANKQ92844 425 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 EGLN2Q96KS0 407 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 DCBLD2Q96PD2 775 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 TMEM120AQ9BXJ8 343 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 PRDM9Q9NQV7 894 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 SEMA3GQ9NS98 782 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 KLHL14Q9P2G3 628 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 ADAM21Q9UKJ8 722 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 MMACHCQ9Y4U1 282 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 FER1L5A0AVI2 2057 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 CELSR3Q9NYQ7 3312 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 SEC16AO15027 2179 aa11.51□□□□□ -0.57
SHMT2-209ENST00000553949 SCN3AQ9NY46 2000 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 IGKV3D-11A0A0A0MRZ8 115 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 WASHC1A8K0Z3 465 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 E9PBE3 544 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 TAF4O00268 1085 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 PGRMC2O15173 223 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 KLHL41O60662 606 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 LDB3O75112 727 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 ALOX12BO75342 701 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 IGHEP01854 428 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 C8orf89P0DMQ9 161 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 WT1P19544 449 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-209ENST00000553949 DDCP20711 480 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 MAOAP21397 527 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 DRD4P21917 467 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 MMP11P24347 488 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 ALDH9A1P49189 494 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 ARFIP2P53365 341 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 IL10RAQ13651 578 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 SSPNQ14714 243 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 PTGR1Q14914 329 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 NSDHLQ15738 373 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 TMEM198Q66K66 360 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 SLC48A1Q6P1K1 146 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 KDF1Q8NAX2 398 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-209ENST00000553949 DNAJB14Q8TBM8 379 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 TSLPQ969D9 159 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 GFM2Q969S9 779 aaKnown RBP11.5□□□□□ -0.57
SHMT2-209ENST00000553949 ANKRD9Q96BM1 317 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-209ENST00000553949 SLC45A3Q96JT2 553 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 PTCHD1Q96NR3 888 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 CCNL2Q96S94 520 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-209ENST00000553949 FAM107BQ9H098 131 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 NSRP1Q9H0G5 558 aaKnown RBP11.5□□□□□ -0.57
SHMT2-209ENST00000553949 NECTIN3Q9NQS3 549 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 AIG1Q9NVV5 245 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 C5AR2Q9P296 337 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 CES1P1Q9UKY3 287 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 EXO1Q9UQ84 846 aaKnown RBP11.5□□□□□ -0.57
SHMT2-209ENST00000553949 SSUH2Q9Y2M2 353 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 CLDN16Q9Y5I7 305 aa11.5□□□□□ -0.57
SHMT2-209ENST00000553949 TGFBR3LH3BV60 316 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 UBDO15205 165 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 EFSO43281 561 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 AKAP10O43572 662 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 FGF17O60258 216 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 SHOX2O60902 331 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-209ENST00000553949 LRATO95237 230 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 GPR75O95800 540 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 IDO1P14902 403 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 PPP2R1BP30154 601 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 OTX2P32243 289 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 CLDN8P56748 225 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 ID2Q02363 134 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 FOLH1Q04609 750 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 ACTN3Q08043 901 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms