RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 ARMC3Q5W041 872 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 HMBOX1Q6NT76 420 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 CNGA4Q8IV77 575 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 ZNF595Q8IYB9 648 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 TMEM132CQ8N3T6 1108 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 RASGEF1CQ8N431 466 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 OTUD6BQ8N6M0 293 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 FAM47BQ8NA70 645 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 OR14A16Q8NHC5 309 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 NUBPLQ8TB37 319 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 SLC2A12Q8TD20 617 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 EEF1AKMT1Q8WVE0 214 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 GAL3ST3Q96A11 431 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 MS4A6EQ96DS6 147 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 SPACA9Q96E40 222 aaPredicted RBP8.3□□□□□ -1.08
PRKCH-208ENST00000553846 WDYHV1Q96HA8 205 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 CALR3Q96L12 384 aaKnown RBP8.3□□□□□ -1.08
PRKCH-208ENST00000553846 G6PC3Q9BUM1 346 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 RBM24Q9BX46 236 aaKnown RBP8.3□□□□□ -1.08
PRKCH-208ENST00000553846 NPLQ9BXD5 320 aaPredicted RBP8.3□□□□□ -1.08
PRKCH-208ENST00000553846 FBXO6Q9NRD1 293 aaPredicted RBP8.3□□□□□ -1.08
PRKCH-208ENST00000553846 PRTFDC1Q9NRG1 225 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 BFARQ9NZS9 450 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 PAK5Q9P286 719 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 BOKQ9UMX3 212 aaPredicted RBP8.3□□□□□ -1.08
PRKCH-208ENST00000553846 PACSIN2Q9UNF0 486 aaPredicted RBP8.3□□□□□ -1.08
PRKCH-208ENST00000553846 SYCE3A1L190 88 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 ANKRD33BA6NCL7 494 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 SYNDIG1LA6NDD5 238 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 NRDCO43847 1150 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 SERPIND1P05546 499 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 HPNP05981 417 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 FBXO45P0C2W1 286 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 CETN2P41208 172 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 MAGEA6P43360 314 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 CDK9P50750 372 aaKnown RBP8.29□□□□□ -1.08
PRKCH-208ENST00000553846 IGLV3-21P80748 117 aaPredicted RBP8.29□□□□□ -1.08
PRKCH-208ENST00000553846 ASPHQ12797 758 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 TOR1AIP1Q5JTV8 583 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 SLC22A10Q63ZE4 541 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 DUPD1Q68J44 220 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 C20orf204Q6ZNR8 217 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 VN1R5Q7Z5H4 357 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 CLNKQ7Z7G1 428 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 HIPK1Q86Z02 1210 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.29□□□□□ -1.08
PRKCH-208ENST00000553846 PM20D2Q8IYS1 436 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 CCDC170Q8IYT3 715 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 AGGF1Q8N302 714 aaeCLIP8.29□□□□□ -1.08
PRKCH-208ENST00000553846 TRPV3Q8NET8 790 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 OR10G3Q8NGC4 313 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 SLC5A11Q8WWX8 675 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 TMEM158Q8WZ71 300 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 DAZLQ92904 295 aaKnown RBP8.29□□□□□ -1.08
PRKCH-208ENST00000553846 FBXL8Q96CD0 374 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 HES6Q96HZ4 224 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 UCN2Q96RP3 112 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 CCL19Q99731 98 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 SFXN3Q9BWM7 321 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 UGT2B28Q9BY64 529 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 FRMD8P1Q9BZ68 369 aaPredicted RBP8.29□□□□□ -1.08
PRKCH-208ENST00000553846 OR8D2Q9GZM6 311 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 EXO5Q9H790 373 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 CALHM2Q9HA72 323 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 PELI2Q9HAT8 420 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 C6orf203Q9P0P8 240 aaPredicted RBP8.29□□□□□ -1.08
PRKCH-208ENST00000553846 IKZF3Q9UKT9 509 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 WIF1Q9Y5W5 379 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 CLCA3PQ9Y6N3 262 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 PRR14LQ5THK1 2151 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 MGAM2Q2M2H8 2515 aa8.29□□□□□ -1.08
PRKCH-208ENST00000553846 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 C15orf38-AP3S2A0A0A6YYH1 394 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 A0A0G2JN53 185 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 MYOCOSA0A1B0GUC4 107 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 LRIT2A6NDA9 550 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 A8MXE2 369 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 MIF4GDA9UHW6 222 aaKnown RBP8.28□□□□□ -1.08
PRKCH-208ENST00000553846 AKR1B15C9JRZ8 316 aaPredicted RBP8.28□□□□□ -1.08
PRKCH-208ENST00000553846 HRKO00198 91 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 PFDN6O15212 129 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 PHF1O43189 567 aaPredicted RBP8.28□□□□□ -1.08
PRKCH-208ENST00000553846 CTNSO60931 367 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 TNFSF13O75888 250 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 LRATO95237 230 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 CLPSP04118 112 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 TPM3P06753 285 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 TMIGD3P0DMS9 266 aaPredicted RBP8.28□□□□□ -1.08
PRKCH-208ENST00000553846 TPSB2P20231 275 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 FPR1P21462 350 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 CRYGSP22914 178 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 MC3RP41968 323 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 LIM2P55344 173 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 KCNJ2P63252 427 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 BTN3A2P78410 334 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 DMTNQ08495 405 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 SLC13A2Q13183 592 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 TNK1Q13470 666 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 TPSAB1Q15661 275 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 NTRK2Q16620 822 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms