RNA–Protein interactions for RNA: ENST00000553673.1

FCF1-204, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-204ENST00000553673 IL17RELQ6ZVW7 336 aa3.63□□□□□ -1.83
FCF1-204ENST00000553673 ANKRD33Q7Z3H0 272 aa3.63□□□□□ -1.83
FCF1-204ENST00000553673 NRARPQ7Z6K4 114 aa3.63□□□□□ -1.83
FCF1-204ENST00000553673 HSCBQ8IWL3 235 aa3.63□□□□□ -1.83
FCF1-204ENST00000553673 DCLK2Q8N568 766 aa3.63□□□□□ -1.83
FCF1-204ENST00000553673 FAM89BQ8N5H3 189 aa3.63□□□□□ -1.83
FCF1-204ENST00000553673 ZNF614Q8N883 585 aa3.63□□□□□ -1.83
FCF1-204ENST00000553673 OR6S1Q8NH40 331 aa3.63□□□□□ -1.83
FCF1-204ENST00000553673 MAPK15Q8TD08 544 aa3.63□□□□□ -1.83
FCF1-204ENST00000553673 SMAP2Q8WU79 429 aaPredicted RBP3.63□□□□□ -1.83
FCF1-204ENST00000553673 APOBEC4Q8WW27 367 aaKnown RBP3.63□□□□□ -1.83
FCF1-204ENST00000553673 NSMAFQ92636 917 aa3.63□□□□□ -1.83
FCF1-204ENST00000553673 SNX21Q969T3 373 aa3.63□□□□□ -1.83
FCF1-204ENST00000553673 AZIN2Q96A70 460 aa3.63□□□□□ -1.83
FCF1-204ENST00000553673 LINC00479Q96M42 142 aa3.63□□□□□ -1.83
FCF1-204ENST00000553673 ZMAT2Q96NC0 199 aaKnown RBP3.63□□□□□ -1.83
FCF1-204ENST00000553673 CDCA3Q99618 268 aaPredicted RBP3.63□□□□□ -1.83
FCF1-204ENST00000553673 CCDC3Q9BQI4 270 aa3.63□□□□□ -1.83
FCF1-204ENST00000553673 TRIM51Q9BSJ1 452 aa3.63□□□□□ -1.83
FCF1-204ENST00000553673 ZNF577Q9BSK1 485 aa3.63□□□□□ -1.83
FCF1-204ENST00000553673 SMC3Q9UQE7 1217 aa3.63□□□□□ -1.83
FCF1-204ENST00000553673 PPP2R2CQ9Y2T4 447 aa3.63□□□□□ -1.83
FCF1-204ENST00000553673 KIF3AQ9Y496 699 aa3.63□□□□□ -1.83
FCF1-204ENST00000553673 GRIN2DO15399 1336 aa3.63□□□□□ -1.83
FCF1-204ENST00000553673 NFASCO94856 1347 aa3.63□□□□□ -1.83
FCF1-204ENST00000553673 GSTTP1A0A1W2PQM5 241 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 C15orf61A6NNL5 157 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 H3BQV1 296 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 HAS3O00219 553 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 MSH4O15457 936 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 SLC37A4O43826 429 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 HSPA4LO95757 839 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 CCNE2O96020 404 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 C9P02748 559 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 VIMP08670 466 aaKnown RBP3.62□□□□□ -1.83
FCF1-204ENST00000553673 SUPT20HL2P0C7V6 817 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 SFTPDP35247 375 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 TCF7P36402 384 aaPredicted RBP3.62□□□□□ -1.83
FCF1-204ENST00000553673 LEPRP48357 1165 aaKnown RBP3.62□□□□□ -1.83
FCF1-204ENST00000553673 IRX1P78414 480 aaPredicted RBP3.62□□□□□ -1.83
FCF1-204ENST00000553673 GUCY2DQ02846 1103 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 EFTUD2Q15029 972 aaKnown RBP eCLIP3.62□□□□□ -1.83
FCF1-204ENST00000553673 GPR33Q49SQ1 333 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 SHEQ5VZ18 495 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 BSPRYQ5W0U4 402 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 FAM91A1Q658Y4 838 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 SUSD1Q6UWL2 747 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 BTN2A1Q7KYR7 527 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 FCRLAQ7L513 359 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 PTAR1Q7Z6K3 402 aaPredicted RBP3.62□□□□□ -1.83
FCF1-204ENST00000553673 C4orf19Q8IY42 314 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 RCOR2Q8IZ40 523 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 KLHDC1Q8N7A1 406 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 CCDC63Q8NA47 563 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 GATAD1Q8WUU5 269 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 PIK3R3Q92569 461 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 RAD54LQ92698 747 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 P2RX5Q93086 422 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 FAM162AQ96A26 154 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 PYCR2Q96C36 320 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 MBOAT7Q96N66 472 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 NECTIN4Q96NY8 510 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 BTBD9Q96Q07 612 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 USP28Q96RU2 1077 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 INPP5KQ9BT40 448 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 MCRIP2Q9BUT9 160 aaKnown RBP3.62□□□□□ -1.83
FCF1-204ENST00000553673 TEKT3Q9BXF9 490 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 TRPV6Q9H1D0 765 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 AZI2Q9H6S1 392 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 ERAP1Q9NZ08 941 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 TMEM181Q9P2C4 612 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 PRDM4Q9UKN5 801 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 PPP1R3CQ9UQK1 317 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 FOCADQ5VW36 1801 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 MROH7Q68CQ1 1323 aa3.62□□□□□ -1.83
FCF1-204ENST00000553673 MYO5AQ9Y4I1 1855 aaKnown RBP3.62□□□□□ -1.83
FCF1-204ENST00000553673 A0A0G2JMZ2 1700 aa3.61□□□□□ -1.83
FCF1-204ENST00000553673 LAMB1P07942 1786 aa3.61□□□□□ -1.83
FCF1-204ENST00000553673 PHIPQ8WWQ0 1821 aa3.61□□□□□ -1.83
FCF1-204ENST00000553673 IGLV7-46A0A075B6I9 117 aa3.61□□□□□ -1.83
FCF1-204ENST00000553673 A0A087WUV0 522 aaPredicted RBP3.61□□□□□ -1.83
FCF1-204ENST00000553673 SNURFLB1AK76 121 aa3.61□□□□□ -1.83
FCF1-204ENST00000553673 ZNF195O14628 629 aa3.61□□□□□ -1.83
FCF1-204ENST00000553673 CHMP2AO43633 222 aa3.61□□□□□ -1.83
FCF1-204ENST00000553673 NEMFO60524 1076 aa3.61□□□□□ -1.83
FCF1-204ENST00000553673 ZFAND5O76080 213 aa3.61□□□□□ -1.83
FCF1-204ENST00000553673 PGLSO95336 258 aa3.61□□□□□ -1.83
FCF1-204ENST00000553673 SIX3O95343 332 aaPredicted RBP3.61□□□□□ -1.83
FCF1-204ENST00000553673 GBAP04062 536 aa3.61□□□□□ -1.83
FCF1-204ENST00000553673 RPN1P04843 607 aaKnown RBP3.61□□□□□ -1.83
FCF1-204ENST00000553673 ATP1B1P05026 303 aa3.61□□□□□ -1.83
FCF1-204ENST00000553673 SERPING1P05155 500 aa3.61□□□□□ -1.83
FCF1-204ENST00000553673 STAG3L1P0CL83 205 aa3.61□□□□□ -1.83
FCF1-204ENST00000553673 SMIM10L2AP0DMW4 78 aa3.61□□□□□ -1.83
FCF1-204ENST00000553673 SMIM10L2BP0DMW5 78 aa3.61□□□□□ -1.83
FCF1-204ENST00000553673 RPL35AP18077 110 aaKnown RBP3.61□□□□□ -1.83
FCF1-204ENST00000553673 ADRA2CP18825 462 aa3.61□□□□□ -1.83
FCF1-204ENST00000553673 U2AF2P26368 475 aaKnown RBP eCLIP3.61□□□□□ -1.837e-7■□□□□ 8.5
FCF1-204ENST00000553673 ELAVL4P26378 380 aaKnown RBP3.61□□□□□ -1.83
FCF1-204ENST00000553673 HLA-FP30511 346 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms