RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 PIGQQ9BRB3 760 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 DOHHQ9BU89 302 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 IL22Q9GZX6 179 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 SPNS1Q9H2V7 528 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 RAB6BQ9NRW1 208 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 ABHD10Q9NUJ1 306 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 PDE10AQ9Y233 779 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 MRPS33Q9Y291 106 aaKnown RBP12.63□□□□□ -0.39
PRPF39-204ENST00000553605 MED16Q9Y2X0 877 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 DHRS7Q9Y394 339 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 RAI1Q7Z5J4 1906 aaPredicted RBP12.62□□□□□ -0.39
PRPF39-204ENST00000553605 SNPHO15079 494 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 RCBTB2O95199 551 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 OGNP20774 298 aaKnown RBP12.62□□□□□ -0.39
PRPF39-204ENST00000553605 RPL22P35268 128 aaKnown RBP12.62□□□□□ -0.39
PRPF39-204ENST00000553605 CPOXP36551 454 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 SLCO1A2P46721 670 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 RAB38P57729 211 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 FAM27E3Q08E93 113 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 CSHL1Q14406 222 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 NHSL2Q5HYW2 709 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 TOR1AIP1Q5JTV8 583 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 LYPD8Q6UX82 237 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 CPNE9Q8IYJ1 553 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 ANKRD53Q8N9V6 530 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 FAM47BQ8NA70 645 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 FAM13CQ8NE31 585 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 SLC22A8Q8TCC7 542 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 ZPLD1Q8TCW7 415 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 SLC2A12Q8TD20 617 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 ALG3Q92685 438 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 PYCR2Q96C36 320 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 INTS12Q96CB8 462 aaKnown RBP12.62□□□□□ -0.39
PRPF39-204ENST00000553605 FAR2Q96K12 515 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 ZFP3Q96NJ6 502 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 RUNDC3BQ96NL0 473 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 MED18Q9BUE0 208 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 NPLQ9BXD5 320 aaPredicted RBP12.62□□□□□ -0.39
PRPF39-204ENST00000553605 UGT2B28Q9BY64 529 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 ALOXE3Q9BYJ1 711 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 ADAMTS6Q9UKP5 1117 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 TFR2Q9UP52 801 aa12.62□□□□□ -0.39
PRPF39-204ENST00000553605 CHCHD2Q9Y6H1 151 aaPredicted RBP12.62□□□□□ -0.39
PRPF39-204ENST00000553605 NINQ8N4C6 2090 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 USF3Q68DE3 2245 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 C17orf105B2RV13 164 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 CTNSO60931 367 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 TMCC2O75069 709 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 TRIM3O75382 744 aaPredicted RBP12.61□□□□□ -0.39
PRPF39-204ENST00000553605 LRATO95237 230 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 IFNB1P01574 187 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 HPNP05981 417 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 SERPINA6P08185 405 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 CYP4B1P13584 511 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 SAT1P21673 171 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 NPY2RP49146 381 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 CDK9P50750 372 aaKnown RBP12.61□□□□□ -0.39
PRPF39-204ENST00000553605 STX4Q12846 297 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 DCST1Q5T197 706 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 LUZP1Q86V48 1076 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 CILP2Q8IUL8 1156 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 SLC15A4Q8N697 577 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 OR10G3Q8NGC4 313 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 KCNJ9Q92806 393 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 ABTB1Q969K4 478 aaPredicted RBP12.61□□□□□ -0.39
PRPF39-204ENST00000553605 MARK4Q96L34 752 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 ZNF597Q96LX8 424 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 OR4K3Q96R72 315 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 GPR21Q99679 349 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 TM9SF2Q99805 663 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 KIFC1Q9BW19 673 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 AICDAQ9GZX7 198 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 CCDC68Q9H2F9 335 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 PARVBQ9HBI1 364 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 INTS10Q9NVR2 710 aaKnown RBP12.61□□□□□ -0.39
PRPF39-204ENST00000553605 BFARQ9NZS9 450 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 COPS7AQ9UBW8 275 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 CDC42EP3Q9UKI2 254 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 PACSIN3Q9UKS6 424 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 CNOT11Q9UKZ1 510 aaKnown RBP12.61□□□□□ -0.39
PRPF39-204ENST00000553605 WIF1Q9Y5W5 379 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 HEATR5AQ86XA9 2040 aa12.61□□□□□ -0.39
PRPF39-204ENST00000553605 A0A0G2JN53 185 aa12.6□□□□□ -0.39
PRPF39-204ENST00000553605 LOXP28300 417 aaPredicted RBP12.6□□□□□ -0.39
PRPF39-204ENST00000553605 SOX18P35713 384 aa12.6□□□□□ -0.39
PRPF39-204ENST00000553605 RPL21P46778 160 aaKnown RBP12.6□□□□□ -0.39
PRPF39-204ENST00000553605 EEF1A1P68104 462 aaKnown RBP12.6□□□□□ -0.39
PRPF39-204ENST00000553605 KLF1Q13351 362 aaPredicted RBP12.6□□□□□ -0.39
PRPF39-204ENST00000553605 CTBP1Q13363 440 aa12.6□□□□□ -0.39
PRPF39-204ENST00000553605 GAB1Q13480 694 aa12.6□□□□□ -0.39
PRPF39-204ENST00000553605 RBBP5Q15291 538 aaKnown RBP12.6□□□□□ -0.39
PRPF39-204ENST00000553605 EEF1A1P5Q5VTE0 462 aa12.6□□□□□ -0.39
PRPF39-204ENST00000553605 ZNF549Q6P9A3 640 aa12.6□□□□□ -0.39
PRPF39-204ENST00000553605 PRUNE1Q86TP1 453 aa12.6□□□□□ -0.39
PRPF39-204ENST00000553605 PALM2Q8IXS6 379 aa12.6□□□□□ -0.39
PRPF39-204ENST00000553605 DND1Q8IYX4 353 aaKnown RBP12.6□□□□□ -0.39
PRPF39-204ENST00000553605 NUBPLQ8TB37 319 aa12.6□□□□□ -0.39
PRPF39-204ENST00000553605 CD200R1Q8TD46 325 aa12.6□□□□□ -0.39
PRPF39-204ENST00000553605 ZNF721Q8TF20 911 aa12.6□□□□□ -0.39
PRPF39-204ENST00000553605 NEIL2Q969S2 332 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms