RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 TRPV6Q9H1D0 765 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 TXLNGQ9NUQ3 528 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 TEX10Q9NXF1 929 aaPredicted RBP4.33□□□□□ -1.72
SYNE2-210ENST00000553455 NDUFA13Q9P0J0 144 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 SPASTQ9UBP0 616 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 KCNN3Q9UGI6 736 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 BAIAP2L1Q9UHR4 511 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 MRTO4Q9UKD2 239 aaKnown RBP4.33□□□□□ -1.72
SYNE2-210ENST00000553455 DIMT1Q9UNQ2 313 aaKnown RBP4.33□□□□□ -1.72
SYNE2-210ENST00000553455 PIN4Q9Y237 131 aaKnown RBP4.33□□□□□ -1.72
SYNE2-210ENST00000553455 MRPS2Q9Y399 296 aaKnown RBP4.33□□□□□ -1.72
SYNE2-210ENST00000553455 RNF103-CHMP3A0A140T963 221 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 KRT86O43790 486 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 CSO75390 466 aaKnown RBP4.32□□□□□ -1.72
SYNE2-210ENST00000553455 LYNP07948 512 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 AOC1P19801 751 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 IL10P22301 178 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 LIMK2P53671 638 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 ABCE1P61221 599 aaKnown RBP4.32□□□□□ -1.72
SYNE2-210ENST00000553455 CCZ1BP86790 482 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 CCZ1P86791 482 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-210ENST00000553455 GCKRQ14397 625 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 KRT81Q14533 505 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 MLF2Q15773 248 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-210ENST00000553455 MOGAT2Q3SYC2 334 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 HERC4Q5GLZ8 1057 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-210ENST00000553455 TEX35Q5T0J7 233 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 ADAM5Q6NVV9 412 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 LCLAT1Q6UWP7 414 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 MFSD7Q6UXD7 560 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 ZNF730Q6ZMV8 503 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 GDPGP1Q6ZNW5 385 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 ELMOD2Q8IZ81 293 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 PARP8Q8N3A8 854 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 WDSUB1Q8N9V3 476 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 ESAMQ96AP7 390 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 NAF1Q96HR8 494 aaKnown RBP4.32□□□□□ -1.72
SYNE2-210ENST00000553455 RUNDC3BQ96NL0 473 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 OPRPNQ99935 248 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-210ENST00000553455 FUNDC2Q9BWH2 189 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 SIRPDQ9H106 197 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 SLC26A1Q9H2B4 701 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 HSD3B7Q9H2F3 369 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 PARLQ9H300 379 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 NDE1Q9NXR1 346 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 FAM153AQ9UHL3 310 aa4.32□□□□□ -1.72
SYNE2-210ENST00000553455 IGLV7-46A0A075B6I9 117 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 A0A0U1RRA0 63 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 OR5H15A6NDH6 313 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 PRPSAP2O60256 369 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 SOCS5O75159 536 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 PGK2P07205 417 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 MARCKSP29966 332 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-210ENST00000553455 CCL11P51671 97 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 CRYBA2P53672 197 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 ATXN3P54252 364 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-210ENST00000553455 RPL27P61353 136 aaKnown RBP4.31□□□□□ -1.72
SYNE2-210ENST00000553455 KIAA0141Q14154 515 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-210ENST00000553455 GAMTQ14353 236 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 EXOSC7Q15024 291 aaKnown RBP4.31□□□□□ -1.72
SYNE2-210ENST00000553455 NECTIN1Q15223 517 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 UPP1Q16831 310 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 MPPE1Q53F39 396 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 DCAF12Q5T6F0 453 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 ZC2HC1BQ5TFG8 222 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 TRIM65Q6PJ69 517 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 WDR88Q6ZMY6 472 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 SLC22A16Q86VW1 577 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 ZFAND4Q86XD8 727 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 PRSS33Q8NF86 280 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 OR6F1Q8NGZ6 308 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 MRPL24Q96A35 216 aaKnown RBP4.31□□□□□ -1.72
SYNE2-210ENST00000553455 POM121L2Q96KW2 1035 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 PRICKLE1Q96MT3 831 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-210ENST00000553455 TAAR6Q96RI8 345 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 SPAG8Q99932 426 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-210ENST00000553455 FGFBP2Q9BYJ0 223 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 C1orf21Q9H246 121 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 PLEKHA3Q9HB20 300 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 UBE2TQ9NPD8 197 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-210ENST00000553455 THEGQ9P2T0 379 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 THAP10Q9P2Z0 257 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-210ENST00000553455 CCPG1Q9ULG6 757 aa4.31□□□□□ -1.72
SYNE2-210ENST00000553455 TMEM89A2RUT3 159 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 CFAP73A6NFT4 308 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 C19orf81C9J6K1 198 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 EEF2KO00418 725 aaKnown RBP4.3□□□□□ -1.72
SYNE2-210ENST00000553455 INPP4BO15327 924 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 ARHGEF9O43307 516 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 KIAA0513O60268 411 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 NME2P1O60361 137 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 REC8O95072 547 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 FHP07954 510 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 ETS1P14921 441 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 MT3P25713 68 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 MAPK3P27361 379 aaPredicted RBP4.3□□□□□ -1.72
SYNE2-210ENST00000553455 AKT2P31751 481 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 FCGR2BP31994 310 aaPredicted RBP4.3□□□□□ -1.72
SYNE2-210ENST00000553455 FCGR2CP31995 323 aa4.3□□□□□ -1.72
SYNE2-210ENST00000553455 CD86P42081 329 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms