RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 SLC5A10A0PJK1 596 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 LRRD1A4D1F6 860 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 OR2A25A4D2G3 310 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 GRID2IPA4D2P6 1211 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 ARHGEF33A8MVX0 844 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 A8MXE2 369 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 GPRIN2O60269 458 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 ZNF500O60304 480 aaPredicted RBP4.74□□□□□ -1.65
CKAP4-203ENST00000553039 TPM2P07951 284 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 OR56A5P0C7T3 313 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 TMIGD3P0DMS9 266 aaPredicted RBP4.74□□□□□ -1.65
CKAP4-203ENST00000553039 IL1R2P27930 398 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 SSR1P43307 286 aaKnown RBP4.74□□□□□ -1.65
CKAP4-203ENST00000553039 NR0B1P51843 470 aaKnown RBP4.74□□□□□ -1.65
CKAP4-203ENST00000553039 SKP1P63208 163 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 VLDLRP98155 873 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 LOXL1Q08397 574 aaPredicted RBP4.74□□□□□ -1.65
CKAP4-203ENST00000553039 RCAN2Q14206 197 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 SLC1A5Q15758 541 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 HKDC1Q2TB90 917 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 TMEM249Q2WGJ8 235 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 ACSF3Q4G176 576 aaPredicted RBP4.74□□□□□ -1.65
CKAP4-203ENST00000553039 ZNF658BQ4V348 819 aaPredicted RBP4.74□□□□□ -1.65
CKAP4-203ENST00000553039 CT83Q5H943 113 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 INTS11Q5TA45 600 aaKnown RBP4.74□□□□□ -1.65
CKAP4-203ENST00000553039 NIPAL1Q6NVV3 410 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 SASS6Q6UVJ0 657 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 IL20RBQ6UXL0 311 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 RTL4Q6ZR62 310 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 LUZP2Q86TE4 346 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 TAX1BP1Q86VP1 789 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 DCUN1D3Q8IWE4 304 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 PLD6Q8N2A8 252 aaKnown RBP4.74□□□□□ -1.65
CKAP4-203ENST00000553039 RASGEF1CQ8N431 466 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 KIF2BQ8N4N8 673 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 CLDN19Q8N6F1 224 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 MCUQ8NE86 351 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 OR9A4Q8NGU2 314 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 NEIL3Q8TAT5 605 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 HMGCLL1Q8TB92 370 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 NAT14Q8WUY8 206 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 IGFBPL1Q8WX77 278 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 ANP32BQ92688 251 aaKnown RBP4.74□□□□□ -1.65
CKAP4-203ENST00000553039 TRIM11Q96F44 468 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 HS6ST2Q96MM7 605 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 FOPNLQ96NB1 174 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 ALS2CR12Q96Q35 445 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 OR2A5Q96R48 311 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 EBNA1BP2Q99848 306 aaKnown RBP4.74□□□□□ -1.65
CKAP4-203ENST00000553039 FICDQ9BVA6 458 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 TSSK1BQ9BXA7 367 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 FAM129AQ9BZQ8 928 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 QRSL1Q9H0R6 528 aaKnown RBP4.74□□□□□ -1.65
CKAP4-203ENST00000553039 VPS11Q9H270 941 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 SLCO5A1Q9H2Y9 848 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 FAM96AQ9H5X1 160 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 AKTIPQ9H8T0 292 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 GRPEL1Q9HAV7 217 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 ANKHQ9HCJ1 492 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 MRPS30Q9NP92 439 aaKnown RBP4.74□□□□□ -1.65
CKAP4-203ENST00000553039 DEPPQ9NTK1 212 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 GALNT8Q9NY28 637 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 ELOVL5Q9NYP7 299 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 SMARCAL1Q9NZC9 954 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 HCN3Q9P1Z3 774 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 LAMP3Q9UQV4 416 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 TESMINQ9Y4I5 508 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 NBEAL2Q6ZNJ1 2754 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 IGLV3-16A0A075B6K0 115 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 A0A087WV62 115 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 C15orf38-AP3S2A0A0A6YYH1 394 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 TMEM82A0PJX8 343 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 PINLYPA6NC86 204 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 MBD3L3A6NE82 208 aaPredicted RBP4.73□□□□□ -1.65
CKAP4-203ENST00000553039 OR2W5A6NFC9 320 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 LRRC10BA6NIK2 292 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 C16orf97H3BN30 126 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 M0R3H8 397 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 HS3ST1O14792 307 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 MSTNO14793 375 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 SLC16A6O15403 523 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 MFSD11O43934 449 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 RCBTB2O95199 551 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 CCNDBP1O95273 360 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 FTLP02792 175 aaPredicted RBP4.73□□□□□ -1.65
CKAP4-203ENST00000553039 APOA4P06727 396 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 TMEM253P0C7T8 217 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 MYBL1P10243 752 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 COL6A2P12110 1019 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 GZMAP12544 262 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 EZRP15311 586 aaKnown RBP4.73□□□□□ -1.65
CKAP4-203ENST00000553039 ZFXP17010 805 aaPredicted RBP4.73□□□□□ -1.65
CKAP4-203ENST00000553039 TNFSF4P23510 183 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 HRH2P25021 359 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 ACRV1P26436 265 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 ACVR1BP36896 505 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 HSD17B2P37059 387 aa4.73□□□□□ -1.65
CKAP4-203ENST00000553039 PPARGP37231 505 aaPredicted RBP4.73□□□□□ -1.65
CKAP4-203ENST00000553039 RPL21P46778 160 aaKnown RBP4.73□□□□□ -1.65
CKAP4-203ENST00000553039 GZMKP49863 264 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms