RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 FAIM2Q9BWQ8 316 aa10.91□□□□□ -0.66
RAB5C-208ENST00000551338 GPR174Q9BXC1 333 aa10.91□□□□□ -0.66
RAB5C-208ENST00000551338 GSDMCQ9BYG8 508 aa10.91□□□□□ -0.66
RAB5C-208ENST00000551338 YTHDF1Q9BYJ9 559 aaKnown RBP10.91□□□□□ -0.66
RAB5C-208ENST00000551338 REEP1Q9H902 201 aa10.91□□□□□ -0.66
RAB5C-208ENST00000551338 LTB4R2Q9NPC1 389 aa10.91□□□□□ -0.66
RAB5C-208ENST00000551338 A4GALTQ9NPC4 353 aa10.91□□□□□ -0.66
RAB5C-208ENST00000551338 POT1Q9NUX5 634 aa10.91□□□□□ -0.66
RAB5C-208ENST00000551338 EVA1BQ9NVM1 165 aa10.91□□□□□ -0.66
RAB5C-208ENST00000551338 TUBA8Q9NY65 449 aaPredicted RBP10.91□□□□□ -0.66
RAB5C-208ENST00000551338 ACTR10Q9NZ32 417 aa10.91□□□□□ -0.66
RAB5C-208ENST00000551338 C3orf18Q9UK00 162 aa10.91□□□□□ -0.66
RAB5C-208ENST00000551338 FBXW2Q9UKT8 454 aa10.91□□□□□ -0.66
RAB5C-208ENST00000551338 CA14Q9ULX7 337 aa10.91□□□□□ -0.66
RAB5C-208ENST00000551338 PADI2Q9Y2J8 665 aa10.91□□□□□ -0.66
RAB5C-208ENST00000551338 SAMHD1Q9Y3Z3 626 aaKnown RBP10.91□□□□□ -0.66
RAB5C-208ENST00000551338 ATG4BQ9Y4P1 393 aa10.91□□□□□ -0.66
RAB5C-208ENST00000551338 SNX8Q9Y5X2 465 aa10.91□□□□□ -0.66
RAB5C-208ENST00000551338 SLCO1B1Q9Y6L6 691 aa10.91□□□□□ -0.66
RAB5C-208ENST00000551338 A0A087WXM4 84 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 IGHV1OR15-9A0A0B4J2B8 117 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 WASHC1A8K0Z3 465 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 M0QX08 132 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 P2RX6O15547 441 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 TNFSF14O43557 240 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 PRAMEF10O60809 474 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 C9P02748 559 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 THEGLP0DJG4 465 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 POLR2CP19387 275 aaPredicted RBP10.9□□□□□ -0.66
RAB5C-208ENST00000551338 IGFBP5P24593 272 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 ELK4P28324 431 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 CD6P30203 668 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 DAPP51397 102 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 RAB8AP61006 207 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 STXBP1P61764 594 aaKnown RBP10.9□□□□□ -0.66
RAB5C-208ENST00000551338 FZD2Q14332 565 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 MAPK11Q15759 364 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 SMAD2Q15796 467 aaKnown RBP10.9□□□□□ -0.66
RAB5C-208ENST00000551338 CCDC85BQ15834 202 aaPredicted RBP10.9□□□□□ -0.66
RAB5C-208ENST00000551338 RFX4Q33E94 735 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 RPS26P11Q5JNZ5 115 aaPredicted RBP10.9□□□□□ -0.66
RAB5C-208ENST00000551338 TJAP1Q5JTD0 557 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 KDM4DQ6B0I6 523 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 TNFAIP8L2Q6P589 184 aaPredicted RBP10.9□□□□□ -0.66
RAB5C-208ENST00000551338 BORAQ6PGQ7 559 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 CEACAM20Q6UY09 585 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 DGLUCYQ7Z3D6 616 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 TRIM48Q8IWZ4 208 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 C8orf59Q8N0T1 100 aaPredicted RBP10.9□□□□□ -0.66
RAB5C-208ENST00000551338 SRFBP1Q8NEF9 429 aaKnown RBP10.9□□□□□ -0.66
RAB5C-208ENST00000551338 ZNF555Q8NEP9 628 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 TSTD1Q8NFU3 115 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 SLC37A2Q8TED4 501 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 ZFPM2Q8WW38 1151 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 NCSTNQ92542 709 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 SLC22A18Q96BI1 424 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 TM4SF19Q96DZ7 209 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 SLC6A18Q96N87 628 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 AMDHD1Q96NU7 426 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 FCRL4Q96PJ5 515 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 TPSD1Q9BZJ3 242 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 LMAN1LQ9HAT1 526 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 SLC35C2Q9NQQ7 365 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 THSD1Q9NS62 852 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 LYARQ9NX58 379 aaKnown RBP10.9□□□□□ -0.66
RAB5C-208ENST00000551338 THUMPD1Q9NXG2 353 aaKnown RBP10.9□□□□□ -0.66
RAB5C-208ENST00000551338 ANKMY1Q9P2S6 941 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 CES1P1Q9UKY3 287 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 BAG5Q9UL15 447 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 DUSP12Q9UNI6 340 aa10.9□□□□□ -0.66
RAB5C-208ENST00000551338 GOLGA4Q13439 2230 aaKnown RBP10.89□□□□□ -0.67
RAB5C-208ENST00000551338 SPTY2D1-AS1A0A0U1RR47 76 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 A0A1W2PPC4 97 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 A0A1W2PS29 197 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 FAM221BA6H8Z2 402 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 OR6C74A6NCV1 312 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 HMGN4O00479 90 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 PGRMC2O15173 223 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 VILLO15195 856 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 SLC16A6O15403 523 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 CTSVO60911 334 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 GUCY1B2O75343 617 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 VIPP01282 170 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 BCHEP06276 602 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 ZNF888P0CJ79 500 aaPredicted RBP10.89□□□□□ -0.67
RAB5C-208ENST00000551338 SMIM10L1P0DMW3 83 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 IL7RP16871 459 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 CD247P20963 164 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 NTSP30990 170 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 RRM2P31350 389 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 NUDT1P36639 197 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 TSFMP43897 325 aaKnown RBP10.89□□□□□ -0.67
RAB5C-208ENST00000551338 YAP1P46937 504 aaKnown RBP10.89□□□□□ -0.67
RAB5C-208ENST00000551338 LSSP48449 732 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 CCT3P49368 545 aaKnown RBP10.89□□□□□ -0.67
RAB5C-208ENST00000551338 RGS1Q08116 209 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 FZD5Q13467 585 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 SPDYE7PQ495Y7 208 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 ZNF542PQ5EBM4 170 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 ZNF691Q5VV52 312 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms