RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 ISLR2Q6UXK2 745 aa18.63■□□□□ 0.57
SSH1-209ENST00000551165 FAM92BQ6ZTR7 304 aa18.63■□□□□ 0.57
SSH1-209ENST00000551165 C17orf82Q86X59 251 aaPredicted RBP18.63■□□□□ 0.57
SSH1-209ENST00000551165 CCDC116Q8IYX3 515 aa18.63■□□□□ 0.57
SSH1-209ENST00000551165 AVL9Q8NBF6 648 aa18.63■□□□□ 0.57
SSH1-209ENST00000551165 SUN3Q8TAQ9 357 aa18.63■□□□□ 0.57
SSH1-209ENST00000551165 OLAHQ9NV23 265 aa18.63■□□□□ 0.57
SSH1-209ENST00000551165 CNOT11Q9UKZ1 510 aaKnown RBP18.63■□□□□ 0.57
SSH1-209ENST00000551165 CORO2BQ9UQ03 480 aa18.63■□□□□ 0.57
SSH1-209ENST00000551165 AP4B1Q9Y6B7 739 aa18.63■□□□□ 0.57
SSH1-209ENST00000551165 TMEM229AB2RXF0 380 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 DLGAP1O14490 977 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 GSTM5P46439 218 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 SPIDRQ14159 915 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 NKAIN2Q5VXU1 208 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 PPP4R4Q6NUP7 873 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 NFKBIDQ8NI38 313 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 ZBED6CLQ96FA7 236 aaPredicted RBP18.62■□□□□ 0.57
SSH1-209ENST00000551165 ZNF597Q96LX8 424 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 BTBD9Q96Q07 612 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 CSF3RQ99062 836 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 SLC38A3Q99624 504 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 MAP3K3Q99759 626 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 NLNQ9BYT8 704 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 ASPSCR1Q9BZE9 553 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 KCMF1Q9P0J7 381 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 OPN1SWP03999 348 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 CDH3P22223 829 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 NCBP2P52298 156 aaKnown RBP eCLIP18.62■□□□□ 0.57
SSH1-209ENST00000551165 ARFIP1P53367 373 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 BNC1Q01954 994 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 VEZF1Q14119 521 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 SAXO2Q658L1 398 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 SLC48A1Q6P1K1 146 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 TNFAIP8L2Q6P589 184 aaPredicted RBP18.62■□□□□ 0.57
SSH1-209ENST00000551165 SLC25A45Q8N413 288 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 HORMAD2Q8N7B1 307 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 C11orf65Q8NCR3 313 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 TMEM131Q92545 1883 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 RERGQ96A58 199 aaPredicted RBP18.62■□□□□ 0.57
SSH1-209ENST00000551165 ZNF764Q96H86 408 aaPredicted RBP18.62■□□□□ 0.57
SSH1-209ENST00000551165 MAGED4Q96JG8 741 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 SEMA6CQ9H3T2 930 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 ANKRA2Q9H9E1 313 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 EHD3Q9NZN3 535 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 PADI4Q9UM07 663 aa18.62■□□□□ 0.57
SSH1-209ENST00000551165 CABIN1Q9Y6J0 2220 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 PCGF2P35227 344 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 TSFMP43897 325 aaKnown RBP18.61■□□□□ 0.57
SSH1-209ENST00000551165 GFERP55789 205 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 EEF1A2Q05639 463 aaKnown RBP18.61■□□□□ 0.57
SSH1-209ENST00000551165 VAC14Q08AM6 782 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 MAP7Q14244 749 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 GCNT6Q5T4J0 391 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 C6orf120Q7Z4R8 191 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 ZC3H7AQ8IWR0 971 aaKnown RBP18.61■□□□□ 0.57
SSH1-209ENST00000551165 HS3ST5Q8IZT8 346 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 CAMKVQ8NCB2 501 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 OR5T3Q8NGG3 340 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 N4BP2L2Q92802 583 aaPredicted RBP18.61■□□□□ 0.57
SSH1-209ENST00000551165 RAB8BQ92930 207 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 TMBIM1Q969X1 311 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 SERHL2Q9H4I8 314 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 FSCN3Q9NQT6 498 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 ACSS1Q9NUB1 689 aaPredicted RBP18.61■□□□□ 0.57
SSH1-209ENST00000551165 UBAP1Q9NZ09 502 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 SPTBP11277 2137 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 EI24O14681 340 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 PROS1P07225 676 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 BIRC2Q13490 618 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 SPDYE7PQ495Y7 208 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 WDR45BQ5MNZ6 344 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 SPRED1Q7Z699 444 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 CSNK1A1LQ8N752 337 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 NEURL3Q96EH8 262 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 OTUB1Q96FW1 271 aaPredicted RBP18.61■□□□□ 0.57
SSH1-209ENST00000551165 BBS4Q96RK4 519 aa18.61■□□□□ 0.57
SSH1-209ENST00000551165 TECTAO75443 2155 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 NME6O75414 186 aaPredicted RBP18.6■□□□□ 0.57
SSH1-209ENST00000551165 DIRAS1O95057 198 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 PRSS23O95084 383 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 CST1P01037 141 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 ZNF23P17027 643 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 CAPZBP47756 277 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 DHPSP49366 369 aaPredicted RBP18.6■□□□□ 0.57
SSH1-209ENST00000551165 PPM1FP49593 454 aaPredicted RBP18.6■□□□□ 0.57
SSH1-209ENST00000551165 PRIM2P49643 509 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 LIM2P55344 173 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 TGM3Q08188 693 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 MED21Q13503 144 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 INTS11Q5TA45 600 aaKnown RBP18.6■□□□□ 0.57
SSH1-209ENST00000551165 ANKRD34AQ69YU3 496 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 OGFOD3Q6PK18 319 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 CBLL1Q75N03 491 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 SZRD1Q7Z422 152 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 OR4N5Q8IXE1 308 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 GATA6Q92908 595 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 TPD52L3Q96J77 140 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 HSH2DQ96JZ2 352 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 SPATA9Q9BWV2 254 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms