RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 CFAP36Q96G28 342 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 VPS39Q96JC1 886 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 RTP3Q9BQQ7 232 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 CUEDC2Q9H467 287 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 PHPT1Q9NRX4 125 aaPredicted RBP5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 GPR173Q9NS66 373 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 C11orf21Q9P2W6 132 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 WNT16Q9UBV4 365 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 NOCTQ9UK39 431 aaKnown RBP5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 FZD10Q9ULW2 581 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 PTGDR2Q9Y5Y4 395 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 CACNA1IQ9P0X4 2223 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 EPG5Q9HCE0 2579 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 VWA8A3KMH1 1905 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 LAMA5O15230 3695 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 CLUHO75153 1309 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 CEP250Q9BV73 2442 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 USP24Q9UPU5 2620 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 SHISA7A6NL88 538 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 TMEM150CB9EJG8 249 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 F8VVB4 439 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 F8VWA3 439 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 GAPDHSO14556 408 aaPredicted RBP5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 MAGEB2O15479 319 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 TEX28O15482 410 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 CHMP2AO43633 222 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 SNX3O60493 162 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 RNASEH1O60930 286 aaKnown RBP5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 WDR1O75083 606 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 LDB3O75112 727 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 CLDN14O95500 239 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 PRF1P14222 555 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 HOXB2P14652 356 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 ELAVL4P26378 380 aaKnown RBP5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 CHRNA3P32297 505 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 MAGEA8P43361 318 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 NKX2-1P43699 371 aaPredicted RBP5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 SRP54P61011 504 aaKnown RBP5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 HMGN5P82970 282 aaKnown RBP5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 CCDC173Q0VFZ6 552 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 HTR4Q13639 388 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 KARSQ15046 597 aaKnown RBP5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 NONOQ15233 471 aaKnown RBP eCLIP5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 RBMS2Q15434 407 aaKnown RBP5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 CYP4A22Q5TCH4 519 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 AGAP6Q5VW22 663 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 TWF2Q6IBS0 349 aaKnown RBP5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 WDR88Q6ZMY6 472 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 MARK2Q7KZI7 788 aaKnown RBP5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 TMEM126BQ8IUX1 230 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 LAX1Q8IWV1 398 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 CRYBG2Q8N1P7 616 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 TMEM185AQ8NFB2 350 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 SAP25Q8TEE9 199 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 DDB2Q92466 427 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 TANKQ92844 425 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 FGF14Q92915 247 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 WBP2Q969T9 261 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 OXNAD1Q96HP4 312 aaPredicted RBP5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 NSMCE2Q96MF7 247 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 DDX50Q9BQ39 737 aaKnown RBP5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 TMEM245Q9H330 911 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 NGBQ9NPG2 151 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 SLC35D1Q9NTN3 355 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 WRAP73Q9P2S5 460 aaPredicted RBP5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 RALYQ9UKM9 306 aaKnown RBP5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 EXOC7Q9UPT5 735 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 ZNF510Q9Y2H8 683 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 OR2W1Q9Y3N9 320 aa5.66□□□□□ -1.5
TGFBR1-208ENST00000550253 ARHGAP42A6NI28 874 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 ANHXE9PGG2 379 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 E9PI62 339 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 SERPINI2O75830 405 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 OR6B1O95007 311 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 TFAP2AP05549 437 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 LIPFP07098 398 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 KRT19P08727 400 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 DLATP10515 647 aaKnown RBP5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 GSCP56915 257 aaPredicted RBP5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 CX3CL1P78423 397 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 BNC1Q01954 994 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 ROR2Q01974 943 aaKnown RBP5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 SLC34A1Q06495 639 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 DPYSQ14117 519 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 GIT2Q14161 759 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 PRTGQ2VWP7 1150 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 CCDC40Q4G0X9 1142 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 PHLDA2Q53GA4 152 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 TAF1BQ53T94 588 aaPredicted RBP5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 EFHC1Q5JVL4 640 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 SPDYCQ5MJ68 293 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 NDUFAF5Q5TEU4 345 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 PM20D1Q6GTS8 502 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 SHC4Q6S5L8 630 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 PLEKHM3Q6ZWE6 761 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 ANO5Q75V66 913 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 PDCL2Q8N4E4 241 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 SLCO4A1Q96BD0 722 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 SGK494Q96LW2 274 aa5.65□□□□□ -1.5
TGFBR1-208ENST00000550253 FAM20AQ96MK3 541 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms