RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 MLC1Q15049 377 aa16.41■□□□□ 0.22
LETMD1-220ENST00000549686 TRMT5Q32P41 509 aaKnown RBP16.41■□□□□ 0.22
LETMD1-220ENST00000549686 DCAF12Q5T6F0 453 aa16.41■□□□□ 0.22
LETMD1-220ENST00000549686 C18orf63Q68DL7 685 aa16.41■□□□□ 0.22
LETMD1-220ENST00000549686 ANKRD26P1Q6NSI1 321 aa16.41■□□□□ 0.22
LETMD1-220ENST00000549686 RIPOR1Q6ZS17 1223 aa16.41■□□□□ 0.22
LETMD1-220ENST00000549686 OR5T3Q8NGG3 340 aa16.41■□□□□ 0.22
LETMD1-220ENST00000549686 ZFP28Q8NHY6 868 aa16.41■□□□□ 0.22
LETMD1-220ENST00000549686 WDR36Q8NI36 951 aaKnown RBP16.41■□□□□ 0.22
LETMD1-220ENST00000549686 GTF2H4Q92759 462 aa16.41■□□□□ 0.22
LETMD1-220ENST00000549686 COL26A1Q96A83 441 aa16.41■□□□□ 0.22
LETMD1-220ENST00000549686 TBC1D20Q96BZ9 403 aa16.41■□□□□ 0.22
LETMD1-220ENST00000549686 SLC7A6OSQ96CW6 309 aaPredicted RBP16.41■□□□□ 0.22
LETMD1-220ENST00000549686 CLIP3Q96DZ5 547 aa16.41■□□□□ 0.22
LETMD1-220ENST00000549686 CCDC115Q96NT0 180 aa16.41■□□□□ 0.22
LETMD1-220ENST00000549686 DPH2Q9BQC3 489 aaPredicted RBP16.41■□□□□ 0.22
LETMD1-220ENST00000549686 BTBD10Q9BSF8 475 aa16.41■□□□□ 0.22
LETMD1-220ENST00000549686 B3GNT4Q9C0J1 378 aa16.41■□□□□ 0.22
LETMD1-220ENST00000549686 HCN3Q9P1Z3 774 aa16.41■□□□□ 0.22
LETMD1-220ENST00000549686 DHCR7Q9UBM7 475 aaKnown RBP16.41■□□□□ 0.22
LETMD1-220ENST00000549686 CES1P1Q9UKY3 287 aa16.41■□□□□ 0.22
LETMD1-220ENST00000549686 CDV3Q9UKY7 258 aaKnown RBP16.41■□□□□ 0.22
LETMD1-220ENST00000549686 ZNF780BQ9Y6R6 833 aa16.41■□□□□ 0.22
LETMD1-220ENST00000549686 A0A096LPI6 279 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 C15orf38-AP3S2A0A0A6YYH1 394 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 SPAARA0A1B0GVQ0 90 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 ASPDHA6ND91 283 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 RFXANKO14593 260 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 PLD2O14939 933 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 GYG2O15488 501 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 SCN2BO60939 215 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 JMJD7P0C870 316 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 CCL4P13236 92 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 FRKP42685 505 aaPredicted RBP16.4■□□□□ 0.22
LETMD1-220ENST00000549686 NOVA1P51513 510 aaKnown RBP16.4■□□□□ 0.22
LETMD1-220ENST00000549686 PHC1P78364 1004 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 ABHD18Q0P651 414 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 BIKQ13323 160 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 CEBPEQ15744 281 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 ZNF385BQ569K4 471 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 C6orf10Q5SRN2 563 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 ARHGAP40Q5TG30 622 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 SLC2A7Q6PXP3 512 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 ARPINQ7Z6K5 226 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 RETREG3Q86VR2 466 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 PGAM4Q8N0Y7 254 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 MMP21Q8N119 569 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 RBM15BQ8NDT2 890 aaKnown RBP16.4■□□□□ 0.22
LETMD1-220ENST00000549686 OR4K14Q8NGD5 310 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 OR51Q1Q8NH59 317 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 DNAJB14Q8TBM8 379 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 OR5P2Q8WZ92 322 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 KLHL29Q96CT2 875 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 GBP5Q96PP8 586 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 TAAR9Q96RI9 348 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 NEUROD4Q9HD90 331 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 MKKSQ9NPJ1 570 aaPredicted RBP16.4■□□□□ 0.22
LETMD1-220ENST00000549686 TAS2R1Q9NYW7 299 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 MAP10Q9P2G4 905 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 CROTQ9UKG9 612 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 PCDHGA3Q9Y5H0 932 aa16.4■□□□□ 0.22
LETMD1-220ENST00000549686 A0A1W2PRB8 838 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 MYO1GB0I1T2 1018 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 PGRMC2O15173 223 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 HYAL3O43820 417 aaPredicted RBP16.39■□□□□ 0.21
LETMD1-220ENST00000549686 FHP07954 510 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 CSNK2A2P19784 350 aaPredicted RBP16.39■□□□□ 0.21
LETMD1-220ENST00000549686 AGXTP21549 392 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 MPIP34949 423 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 CPOXP36551 454 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 HSD17B7P56937 341 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 PCBP4P57723 403 aaKnown RBP16.39■□□□□ 0.21
LETMD1-220ENST00000549686 DCDP81605 110 aaKnown RBP16.39■□□□□ 0.21
LETMD1-220ENST00000549686 SPRED3Q2MJR0 410 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 PAGE3Q5JUK9 113 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 LRIF1Q5T3J3 769 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 TMEM164Q5U3C3 297 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 PRAMEF17Q5VTA0 474 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 RINLQ6ZS11 566 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 DHDDSQ86SQ9 333 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 TRIML2Q8N7C3 387 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 GOT1L1Q8NHS2 421 aaPredicted RBP16.39■□□□□ 0.21
LETMD1-220ENST00000549686 NUDT8Q8WV74 236 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 EXOSC8Q96B26 276 aaKnown RBP16.39■□□□□ 0.21
LETMD1-220ENST00000549686 LRRC58Q96CX6 371 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 PANX1Q96RD7 426 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 BBS4Q96RK4 519 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 CSF3RQ99062 836 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 SH3GL1Q99961 368 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 APMAPQ9HDC9 416 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 SERHLQ9NQF3 203 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 AP3M1Q9Y2T2 418 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 MMACHCQ9Y4U1 282 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 RIF1Q5UIP0 2472 aaKnown RBP16.39■□□□□ 0.21
LETMD1-220ENST00000549686 ADAMTS20P59510 1910 aa16.39■□□□□ 0.21
LETMD1-220ENST00000549686 ZFHX2Q9C0A1 2572 aaPredicted RBP16.38■□□□□ 0.21
LETMD1-220ENST00000549686 CTNSO60931 367 aa16.38■□□□□ 0.21
LETMD1-220ENST00000549686 DNAJB6O75190 326 aa16.38■□□□□ 0.21
LETMD1-220ENST00000549686 TIAF1O95411 115 aa16.38■□□□□ 0.21
LETMD1-220ENST00000549686 ANP32DO95626 131 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms