RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 CSF3RQ99062 836 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 MAPKAP1Q9BPZ7 522 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 PELOQ9BRX2 385 aaKnown RBP8.71□□□□□ -1.02
YBX3-218ENST00000546298 OR8D2Q9GZM6 311 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 VPS11Q9H270 941 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 ACSS3Q9H6R3 686 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 WDR41Q9HAD4 459 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 ZDHHC18Q9NUE0 388 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 RYDENQ9NUL5 291 aaKnown RBP8.71□□□□□ -1.02
YBX3-218ENST00000546298 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.71□□□□□ -1.02
YBX3-218ENST00000546298 PSD3Q9NYI0 1048 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 TINAGQ9UJW2 476 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 ZNF223Q9UK11 482 aaPredicted RBP8.71□□□□□ -1.02
YBX3-218ENST00000546298 TMCO1Q9UM00 188 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 MEMO1Q9Y316 297 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 ENO4A6NNW6 628 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 E9PLN8 166 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 H0YIV9 168 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 ACOT7O00154 380 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 LDB3O75112 727 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 SH3BGRLO75368 114 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 OR2J2O76002 312 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 WISP2O76076 250 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 HTR1EP28566 365 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 PTGS2P35354 604 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 GMPRP36959 345 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 BUD31P41223 144 aaPredicted RBP8.7□□□□□ -1.02
YBX3-218ENST00000546298 SERPINB9P50453 376 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 PLIN5Q00G26 463 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 PLGLB1Q02325 96 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 GTF2H2Q13888 395 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 RNFT1Q5M7Z0 435 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 GTF2H2CQ6P1K8 395 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 ARHGAP11AQ6P4F7 1023 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 IL20RBQ6UXL0 311 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 RTL4Q6ZR62 310 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 TICAM1Q8IUC6 712 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 ZCCHC7Q8N3Z6 543 aaKnown RBP8.7□□□□□ -1.02
YBX3-218ENST00000546298 MMGT1Q8N4V1 131 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 PSD4Q8NDX1 1056 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 C16orf52Q8NHV5 167 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 AGAP11Q8TF27 550 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 ANKRD9Q96BM1 317 aaPredicted RBP8.7□□□□□ -1.02
YBX3-218ENST00000546298 DGAT2Q96PD7 388 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 RASL10BQ96S79 203 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 VKORC1Q9BQB6 163 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 FUT8Q9BYC5 575 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 OR51B5Q9H339 312 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 RPF2Q9H7B2 306 aaKnown RBP8.7□□□□□ -1.02
YBX3-218ENST00000546298 IPPKQ9H8X2 491 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 DMRT3Q9NQL9 472 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 LYARQ9NX58 379 aaKnown RBP8.7□□□□□ -1.02
YBX3-218ENST00000546298 NINJ2Q9NZG7 142 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 CPSF2Q9P2I0 782 aaKnown RBP8.7□□□□□ -1.02
YBX3-218ENST00000546298 NUP210LQ5VU65 1888 aa8.7□□□□□ -1.02
YBX3-218ENST00000546298 MYOCOSA0A1B0GUC4 107 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 HMX2A2RU54 273 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 TMEM200CA6NKL6 621 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 WWP2O00308 870 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 FOXE1O00358 373 aaPredicted RBP8.69□□□□□ -1.02
YBX3-218ENST00000546298 SAP18O00422 153 aaKnown RBP8.69□□□□□ -1.02
YBX3-218ENST00000546298 FGF17O60258 216 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 PRKNO60260 465 aaPredicted RBP8.69□□□□□ -1.02
YBX3-218ENST00000546298 KRT38O76015 456 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 CLDN9O95484 217 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 CLDN14O95500 239 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 ALDOAP04075 364 aaKnown RBP8.69□□□□□ -1.02
YBX3-218ENST00000546298 CTAGE8P0CG41 777 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 COL6A2P12110 1019 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 COX6B1P14854 86 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 CNR1P21554 472 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 CNTFP26441 200 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 PTGER4P35408 488 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 ARL1P40616 181 aaPredicted RBP8.69□□□□□ -1.02
YBX3-218ENST00000546298 SOX3P41225 446 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 STT3AP46977 705 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 HK2P52789 917 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 GPR85P60893 370 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 RPS13P62277 151 aaKnown RBP8.69□□□□□ -1.02
YBX3-218ENST00000546298 RNF4P78317 190 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 IGLV3-21P80748 117 aaPredicted RBP8.69□□□□□ -1.02
YBX3-218ENST00000546298 ADORA2A-AS1P86434 159 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 IRF9Q00978 393 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 TBL3Q12788 808 aaKnown RBP8.69□□□□□ -1.02
YBX3-218ENST00000546298 CUL3Q13618 768 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 CPSF6Q16630 551 aaKnown RBP eCLIP8.69□□□□□ -1.02
YBX3-218ENST00000546298 MPEG1Q2M385 716 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 TSNAXIP1Q2TAA8 658 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 GLE1Q53GS7 698 aaKnown RBP8.69□□□□□ -1.02
YBX3-218ENST00000546298 C10orf62Q5T681 223 aaPredicted RBP8.69□□□□□ -1.02
YBX3-218ENST00000546298 LGSNQ5TDP6 509 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 NDUFAF5Q5TEU4 345 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 TMEM211Q6ICI0 200 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 GK5Q6ZS86 529 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 MDGA2Q7Z553 956 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 GOLGA7Q7Z5G4 137 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 SLC22A16Q86VW1 577 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 DOLPP1Q86YN1 238 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 LURAP1LQ8IV03 231 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 CTAGE4Q8IX94 777 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms