RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 FAM76AQ8TAV0 307 aa16.42■□□□□ 0.22
CD9-211ENST00000546073 RAB3IL1Q8TBN0 382 aa16.42■□□□□ 0.22
CD9-211ENST00000546073 M1APQ8TC57 530 aa16.42■□□□□ 0.22
CD9-211ENST00000546073 AGR3Q8TD06 166 aa16.42■□□□□ 0.22
CD9-211ENST00000546073 ART5Q96L15 291 aa16.42■□□□□ 0.22
CD9-211ENST00000546073 ACPTQ9BZG2 426 aa16.42■□□□□ 0.22
CD9-211ENST00000546073 KCNK13Q9HB14 408 aa16.42■□□□□ 0.22
CD9-211ENST00000546073 MLXIPLQ9NP71 852 aa16.42■□□□□ 0.22
CD9-211ENST00000546073 ADAP2Q9NPF8 381 aa16.42■□□□□ 0.22
CD9-211ENST00000546073 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.42■□□□□ 0.22
CD9-211ENST00000546073 KCMF1Q9P0J7 381 aa16.42■□□□□ 0.22
CD9-211ENST00000546073 COPS7AQ9UBW8 275 aa16.42■□□□□ 0.22
CD9-211ENST00000546073 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.42■□□□□ 0.22
CD9-211ENST00000546073 ZNF780BQ9Y6R6 833 aa16.42■□□□□ 0.22
CD9-211ENST00000546073 SEC16AO15027 2179 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 A0A1B0GTL3 188 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 TCRBV16S1A1N1A0A5B0 115 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 C1orf226A1L170 272 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 A8MUA0 341 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 CYR61O00622 381 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 DNAJB6O75190 326 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 ALDH9A1P49189 494 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 SOX8P57073 446 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 SNRPNP63162 240 aaKnown RBP16.41■□□□□ 0.22
CD9-211ENST00000546073 HMGCS1Q01581 520 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 RAPSNQ13702 412 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 CRB2Q5IJ48 1285 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 ABHD17BQ5VST6 288 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 PLAG1Q6DJT9 500 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 TMEM151BQ8IW70 566 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 SLC5A8Q8N695 610 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 FDCSPQ8NFU4 85 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 OR4K14Q8NGD5 310 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 CHTF18Q8WVB6 975 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 TSLPQ969D9 159 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 PPP3R2Q96LZ3 170 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 TRIM55Q9BYV6 548 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 ZNF71Q9NQZ8 489 aaPredicted RBP16.41■□□□□ 0.22
CD9-211ENST00000546073 C1orf109Q9NX04 203 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 WBP11Q9Y2W2 641 aaKnown RBP16.41■□□□□ 0.22
CD9-211ENST00000546073 WDFY3Q8IZQ1 3526 aa16.41■□□□□ 0.22
CD9-211ENST00000546073 USP24Q9UPU5 2620 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 A0A1W2PQ72 361 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 DYTNA2CJ06 578 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 OR2W5A6NFC9 320 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 A8MUI8 341 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 ANXA4P09525 319 aaPredicted RBP16.4■□□□□ 0.22
CD9-211ENST00000546073 PRR35P0CG20 571 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 DRD2P14416 443 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 BGNP21810 368 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 FOXA1P55317 472 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 PCOLCEQ15113 449 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 TERF2Q15554 542 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 ELAVL1Q15717 326 aaKnown RBP16.4■□□□□ 0.22
CD9-211ENST00000546073 ATP6AP1LQ52LC2 224 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 NDUFAF5Q5TEU4 345 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 KANK2Q63ZY3 851 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 ISLR2Q6UXK2 745 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 OR14A16Q8NHC5 309 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 CDC26Q8NHZ8 85 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 SUN3Q8TAQ9 357 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 TWIST2Q8WVJ9 160 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 ZNF354BQ96LW1 612 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 CSF3RQ99062 836 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 LRTM1Q9HBL6 345 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 NECTIN3Q9NQS3 549 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 TMED5Q9Y3A6 229 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 RAP2CQ9Y3L5 183 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 ATG4BQ9Y4P1 393 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 ASB4Q9Y574 426 aa16.4■□□□□ 0.22
CD9-211ENST00000546073 PKD1L2Q7Z442 2459 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 IGHV3-20A0A0C4DH32 117 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 SAGE2PA6NJ88 616 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 TMPRSS11DO60235 418 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 LDB3O75112 727 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 GPR75O95800 540 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 CHRNGP07510 517 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 LINC00032P0C843 101 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 DHRS4L1P0CG22 281 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 ALOX15P16050 662 aaPredicted RBP16.39■□□□□ 0.21
CD9-211ENST00000546073 TPP2P29144 1249 aaPredicted RBP16.39■□□□□ 0.21
CD9-211ENST00000546073 TIA1P31483 386 aaKnown RBP eCLIP16.39■□□□□ 0.21
CD9-211ENST00000546073 HTR6P50406 440 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 RPL14P50914 215 aaKnown RBP16.39■□□□□ 0.21
CD9-211ENST00000546073 CLCN2P51788 898 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 TBL3Q12788 808 aaKnown RBP16.39■□□□□ 0.21
CD9-211ENST00000546073 MAD2L1Q13257 205 aaPredicted RBP16.39■□□□□ 0.21
CD9-211ENST00000546073 C18orf63Q68DL7 685 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 RNF165Q6ZSG1 346 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 SCUBE1Q8IWY4 988 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 DEFB126Q9BYW3 111 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 MANSC1Q9H8J5 431 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 MMP25Q9NPA2 562 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 MIEF1Q9NQG6 463 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 THAP1Q9NVV9 213 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 PTGFRNQ9P2B2 879 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 VTI1BQ9UEU0 232 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 TP53TG5Q9Y2B4 290 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 PTPRQQ9UMZ3 2332 aa16.39■□□□□ 0.21
CD9-211ENST00000546073 A0A1W2PR48 441 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms