RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 RSBN1Q5VWQ0 802 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-225ENST00000545920 LAIR1Q6GTX8 287 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 FRMPD2BQ6IN97 320 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 MED27Q6P2C8 311 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 CRTC1Q6UUV9 634 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 TMPRSS11AQ6ZMR5 421 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 ZNF517Q6ZMY9 492 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-225ENST00000545920 GET4Q7L5D6 327 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-225ENST00000545920 GDPD3Q7L5L3 318 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 VTCN1Q7Z7D3 282 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 DDX53Q86TM3 631 aaKnown RBP6.18□□□□□ -1.42
SNHG1-225ENST00000545920 CD163Q86VB7 1156 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 THOC6Q86W42 341 aaKnown RBP6.18□□□□□ -1.42
SNHG1-225ENST00000545920 ANKRD46Q86W74 232 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 RASAL3Q86YV0 1011 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 LAS2Q8IYD9 372 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 NRSN1Q8IZ57 195 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 C10orf111Q8N326 155 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 TRAM1L1Q8N609 369 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 SLC5A8Q8N695 610 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 OR4A15Q8NGL6 344 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 OR8J1Q8NGP2 316 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 OR6F1Q8NGZ6 308 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 LILRB4Q8NHJ6 448 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 ZNF461Q8TAF7 563 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 SPPL2AQ8TCT8 520 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 SETD7Q8WTS6 366 aaKnown RBP6.18□□□□□ -1.42
SNHG1-225ENST00000545920 LINC01599Q8WXQ3 324 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 RPL3LQ92901 407 aaKnown RBP6.18□□□□□ -1.42
SNHG1-225ENST00000545920 PYCR2Q96C36 320 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 TPD52L3Q96J77 140 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 LRIG1Q96JA1 1093 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 DHRS1Q96LJ7 313 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 SAMD11Q96NU1 681 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 VPS35Q96QK1 796 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 BARD1Q99728 777 aaKnown RBP6.18□□□□□ -1.42
SNHG1-225ENST00000545920 ZSCAN5AQ9BUG6 496 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 GON7Q9BXV9 100 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 PRRG3Q9BZD7 231 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 TMEM165Q9HC07 324 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 SLC25A19Q9HC21 320 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 ZBTB20Q9HC78 741 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-225ENST00000545920 SMURF1Q9HCE7 757 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 LTB4R2Q9NPC1 389 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 NMRK2Q9NPI5 230 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 RASSF1Q9NS23 344 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 MRPL39Q9NYK5 338 aaKnown RBP6.18□□□□□ -1.42
SNHG1-225ENST00000545920 ZNF226Q9NYT6 803 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 AHSPQ9NZD4 102 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 SH3BP4Q9P0V3 963 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 FTSJ1Q9UET6 329 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 SLCO3A1Q9UIG8 710 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 RAB23Q9ULC3 237 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 TMCC3Q9ULS5 477 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.18□□□□□ -1.42
SNHG1-225ENST00000545920 SSR3Q9UNL2 185 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 ASB4Q9Y574 426 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 TRIP12Q14669 1992 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-225ENST00000545920 DSPPQ9NZW4 1301 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 TRPM7Q96QT4 1865 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 ZNF106Q9H2Y7 1883 aaKnown RBP6.17□□□□□ -1.42
SNHG1-225ENST00000545920 TSPAN11A1L157 253 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 HYKKA2RU49 373 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 GABRR3A8MPY1 467 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 PSMD11O00231 422 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 GNB5O14775 395 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 KIAA0513O60268 411 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 HCN1O60741 890 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 SNAPC5O75971 98 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 SEMA3DO95025 777 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 GADD45GO95257 159 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 CELF2O95319 508 aaKnown RBP6.17□□□□□ -1.42
SNHG1-225ENST00000545920 CTSBP07858 339 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 YES1P07947 543 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 STSP08842 583 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 ALPIP09923 528 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 LAMP1P11279 417 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 ACADMP11310 421 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 ITGB6P18564 788 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 GSTM3P21266 225 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 UQCRC2P22695 453 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 HLA-DMAP28067 261 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 HOXD10P28358 340 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 ALDH4A1P30038 563 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 C21orf33P30042 268 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-225ENST00000545920 CCND3P30281 292 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-225ENST00000545920 CA5AP35218 305 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 HTR3AP46098 478 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 IDH2P48735 452 aaKnown RBP6.17□□□□□ -1.42
SNHG1-225ENST00000545920 ANXA11P50995 505 aaKnown RBP6.17□□□□□ -1.42
SNHG1-225ENST00000545920 EPHB3P54753 998 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 SLC7A9P82251 487 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 SMAD3P84022 425 aaKnown RBP6.17□□□□□ -1.42
SNHG1-225ENST00000545920 CDK6Q00534 326 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 B4GALNT1Q00973 533 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 SEMG2Q02383 582 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 SLC14A1Q13336 389 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 DOC2AQ14183 400 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 GNA13Q14344 377 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 MAPK11Q15759 364 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms