RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 RGMAQ96B86 450 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 MOAP1Q96BY2 351 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 ZNF354BQ96LW1 612 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 NIPSNAP1Q9BPW8 284 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 MENTQ9BUN1 341 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 CXorf36Q9H7Y0 433 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 TRPV4Q9HBA0 871 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 ZNF226Q9NYT6 803 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 DUSP12Q9UNI6 340 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 MAP4K5Q9Y4K4 846 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 LRRK1Q38SD2 2015 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 PRAMEF33A0A0G2JMD5 474 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 PRRT4C9JH25 899 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 M0R082 166 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 PRAMEF10O60809 474 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 GUCY1B2O75343 617 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 MFN2O95140 757 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 OPN1SWP03999 348 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 BMP4P12644 408 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 OSMP13725 252 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 ENDOUP21128 410 aaKnown RBP11.86□□□□□ -0.51
PAAF1-215ENST00000544909 TGM1P22735 817 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 CHMP24386 653 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 SOAT1P35610 550 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 RGS6P49758 472 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 MANFP55145 182 aaKnown RBP11.86□□□□□ -0.51
PAAF1-215ENST00000544909 MC1RQ01726 317 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 ATP1A4Q13733 1029 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 PTGES3Q15185 160 aaKnown RBP11.86□□□□□ -0.51
PAAF1-215ENST00000544909 GAB4Q2WGN9 574 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 PNCKQ6P2M8 343 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 C12orf40Q86WS4 652 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 TRIM69Q86WT6 500 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 SFXN5Q8TD22 340 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 SLC38A5Q8WUX1 472 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 TM4SF18Q96CE8 201 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 SARGQ9BW04 601 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 SPNS1Q9H2V7 528 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 MTG2Q9H4K7 406 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 RMI1Q9H9A7 625 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 BCL2L10Q9HD36 194 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 RAB23Q9ULC3 237 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 PCDHGA3Q9Y5H0 932 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 PEX16Q9Y5Y5 336 aa11.86□□□□□ -0.51
PAAF1-215ENST00000544909 A0A1W2PRQ8 180 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 AGAP5A6NIR3 686 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 TBX6O95947 436 aaPredicted RBP11.85□□□□□ -0.51
PAAF1-215ENST00000544909 MYCP01106 439 aaPredicted RBP11.85□□□□□ -0.51
PAAF1-215ENST00000544909 EPCAMP16422 314 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 C21orf33P30042 268 aaPredicted RBP11.85□□□□□ -0.51
PAAF1-215ENST00000544909 PPP2R1BP30154 601 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 KCNJ5P48544 419 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 CDK3Q00526 305 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 ST3GAL4Q11206 333 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 ZNF234Q14588 700 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 SLX4IPQ5VYV7 408 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 PLAG1Q6DJT9 500 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 KRT73Q86Y46 540 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 AQP11Q8NBQ7 271 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 OR8J1Q8NGP2 316 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 MYLIPQ8WY64 445 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 SUSD6Q92537 303 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 SMARCD2Q92925 531 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 NXPE3Q969Y0 559 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 NEURL2Q9BR09 285 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 RHNO1Q9BSD3 238 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 TIMM29Q9BSF4 260 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 FAIM2Q9BWQ8 316 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 TEX101Q9BY14 249 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 P2RX2Q9UBL9 471 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 SEC14L4Q9UDX3 406 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 HCFC2Q9Y5Z7 792 aa11.85□□□□□ -0.51
PAAF1-215ENST00000544909 CASC3O15234 703 aaKnown RBP11.84□□□□□ -0.51
PAAF1-215ENST00000544909 KDM1AO60341 852 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 UPK1BO75841 260 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 RECKO95980 971 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 VIPP01282 170 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 SLC35G4P0C7Q5 338 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 S100A5P33763 92 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 SOX6P35712 828 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 P2RY2P41231 377 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 OR1E2P47887 323 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 RPS3AP61247 264 aaKnown RBP11.84□□□□□ -0.51
PAAF1-215ENST00000544909 COPZ1P61923 177 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 POM121L1PQ3SYA9 428 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 KIAA1161Q6NSJ0 714 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 KLHL17Q6TDP4 642 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 TRIM74Q86UV6 250 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 ZBTB8BQ8NAP8 495 aaPredicted RBP11.84□□□□□ -0.51
PAAF1-215ENST00000544909 OR5AR1Q8NGP9 310 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 BBS10Q8TAM1 723 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 UTP15Q8TED0 518 aaKnown RBP11.84□□□□□ -0.51
PAAF1-215ENST00000544909 ITFG2Q969R8 447 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 ARMC5Q96C12 935 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 ASB16Q96NS5 453 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 LRRC3BQ96PB8 259 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 MYOCQ99972 504 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 UCK2Q9BZX2 261 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 NMNAT1Q9HAN9 279 aaPredicted RBP11.84□□□□□ -0.51
PAAF1-215ENST00000544909 SIRT3Q9NTG7 399 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms