RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 PRAMEF17Q5VTA0 474 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 GARNL3Q5VVW2 1013 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 CLEC6AQ6EIG7 209 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 DUS1LQ6P1R4 473 aaKnown RBP6.23□□□□□ -1.41
CDCA3-209ENST00000544610 FAM198BQ6UWH4 519 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 SUSD1Q6UWL2 747 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 LIAT1Q6ZQX7 453 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 MSANTD1Q6ZTZ1 278 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 IKBIPQ70UQ0 350 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 MED25Q71SY5 747 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 RNF44Q7L0R7 432 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 PAGE2Q7Z2X7 111 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 MAMDC2Q7Z304 686 aaPredicted RBP6.23□□□□□ -1.41
CDCA3-209ENST00000544610 TMPRSS11BQ86T26 416 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 PAQR7Q86WK9 346 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 DDIASQ8IXT1 998 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 RBMXL3Q8N7X1 1067 aaKnown RBP6.23□□□□□ -1.41
CDCA3-209ENST00000544610 TMEM102Q8N9M5 508 aaPredicted RBP6.23□□□□□ -1.41
CDCA3-209ENST00000544610 MFSD9Q8NBP5 474 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 OR4E2Q8NGC2 313 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 HUS1BQ8NHY5 278 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 RP9Q8TA86 221 aaKnown RBP6.23□□□□□ -1.41
CDCA3-209ENST00000544610 NT5CQ8TCD5 201 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 CHTF18Q8WVB6 975 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 ESAMQ96AP7 390 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 TUBGCP3Q96CW5 907 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 MTERF3Q96E29 417 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 TCTN2Q96GX1 697 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 PPM1MQ96MI6 270 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 ZNF285Q96NJ3 590 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 SMAD5Q99717 465 aaKnown RBP6.23□□□□□ -1.41
CDCA3-209ENST00000544610 RSRP1Q9BUV0 290 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 C1orf21Q9H246 121 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 AKTIPQ9H8T0 292 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 ZFAND3Q9H8U3 227 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 FANCEQ9HB96 536 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 TNFRSF12AQ9NP84 129 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 SLAMF7Q9NQ25 335 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 DMRT3Q9NQL9 472 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 TXLNGQ9NUQ3 528 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 SOHLH2Q9NX45 425 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 NDE1Q9NXR1 346 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 GPR83Q9NYM4 423 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 LUZP4Q9P127 313 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 MARCOQ9UEW3 520 aaPredicted RBP6.23□□□□□ -1.41
CDCA3-209ENST00000544610 EIF3LQ9Y262 564 aaKnown RBP6.23□□□□□ -1.41
CDCA3-209ENST00000544610 PCSK5Q92824 1860 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 CELSR2Q9HCU4 2923 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 IGKV1-8A0A0C4DH67 115 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 A0A1B0GTL3 188 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 OR6C74A6NCV1 312 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 SLC9B1P1A6NJY1 282 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 ISM1B1AKI9 464 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 TMEM233B4DJY2 109 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 BTN3A3O00478 584 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 FCHO1O14526 889 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 TBX19O60806 448 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 MYO1DO94832 1006 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 UNC5CO95185 931 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 CBX6O95503 412 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 LDLRP01130 860 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 PDYNP01213 254 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 CDH1P12830 882 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 UGT2B7P16662 529 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 PRPS1L1P21108 318 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 CALB2P22676 271 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 PEBP1P30086 187 aaKnown RBP6.22□□□□□ -1.41
CDCA3-209ENST00000544610 GPC1P35052 558 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 DCTP40126 519 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 ARL1P40616 181 aaPredicted RBP6.22□□□□□ -1.41
CDCA3-209ENST00000544610 RRADP55042 308 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 STXBP1P61764 594 aaKnown RBP6.22□□□□□ -1.41
CDCA3-209ENST00000544610 RGS1Q08116 209 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 ACSM2AQ08AH3 577 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 BNIP1Q12981 228 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 STX5Q13190 355 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 ATP1A4Q13733 1029 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 RCAN2Q14206 197 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 ABRAXAS2Q15018 415 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 NCF4Q15080 339 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 ZIC1Q15915 447 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 PDCD2Q16342 344 aaPredicted RBP6.22□□□□□ -1.41
CDCA3-209ENST00000544610 AP5B1Q2VPB7 878 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 SPATS1Q496A3 300 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 SLC9B1Q4ZJI4 515 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 TCTE1Q5JU00 501 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 VWA5B1Q5TIE3 1220 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 FAM69BQ5VUD6 431 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 YOD1Q5VVQ6 348 aaPredicted RBP6.22□□□□□ -1.41
CDCA3-209ENST00000544610 KHDRBS2Q5VWX1 349 aaKnown RBP6.22□□□□□ -1.41
CDCA3-209ENST00000544610 ZNF385CQ66K41 422 aaPredicted RBP6.22□□□□□ -1.41
CDCA3-209ENST00000544610 ACSM2BQ68CK6 577 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 FIGLAQ6QHK4 219 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 RPS27LQ71UM5 84 aaKnown RBP6.22□□□□□ -1.41
CDCA3-209ENST00000544610 CAMKMTQ7Z624 323 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 BTLAQ7Z6A9 289 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 MTDHQ86UE4 582 aaKnown RBP6.22□□□□□ -1.41
CDCA3-209ENST00000544610 TICAM1Q8IUC6 712 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 ARHGAP24Q8N264 748 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 MIER2Q8N344 545 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms