RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 SLC22A9Q8IVM8 553 aa21.7■■□□□ 1.06
CHFR-222ENST00000544093 FAM98AQ8NCA5 519 aaKnown RBP21.7■■□□□ 1.06
CHFR-222ENST00000544093 NCLNQ969V3 563 aa21.7■■□□□ 1.06
CHFR-222ENST00000544093 SIGLEC12Q96PQ1 595 aa21.7■■□□□ 1.06
CHFR-222ENST00000544093 CDK15Q96Q40 435 aa21.7■■□□□ 1.06
CHFR-222ENST00000544093 ELOVL6Q9H5J4 265 aa21.7■■□□□ 1.06
CHFR-222ENST00000544093 RPF2Q9H7B2 306 aaKnown RBP21.7■■□□□ 1.06
CHFR-222ENST00000544093 SEMA4BQ9NPR2 832 aaPredicted RBP21.7■■□□□ 1.06
CHFR-222ENST00000544093 DCDC2Q9UHG0 476 aa21.7■■□□□ 1.06
CHFR-222ENST00000544093 SPTBN1Q01082 2364 aaKnown RBP21.7■■□□□ 1.06
CHFR-222ENST00000544093 ZGRF1Q86YA3 2104 aa21.7■■□□□ 1.06
CHFR-222ENST00000544093 DYRK3O43781 588 aa21.69■■□□□ 1.06
CHFR-222ENST00000544093 MLYCDO95822 493 aa21.69■■□□□ 1.06
CHFR-222ENST00000544093 SBK3P0C264 359 aa21.69■■□□□ 1.06
CHFR-222ENST00000544093 GPR143P51810 404 aa21.69■■□□□ 1.06
CHFR-222ENST00000544093 GSPT2Q8IYD1 628 aaKnown RBP21.69■■□□□ 1.06
CHFR-222ENST00000544093 RNF175Q8N4F7 328 aa21.69■■□□□ 1.06
CHFR-222ENST00000544093 UBLCP1Q8WVY7 318 aaPredicted RBP21.69■■□□□ 1.06
CHFR-222ENST00000544093 TMEM125Q96AQ2 219 aa21.69■■□□□ 1.06
CHFR-222ENST00000544093 NSUN5Q96P11 429 aaKnown RBP21.69■■□□□ 1.06
CHFR-222ENST00000544093 WDR41Q9HAD4 459 aa21.69■■□□□ 1.06
CHFR-222ENST00000544093 ANKRD10Q9NXR5 420 aa21.69■■□□□ 1.06
CHFR-222ENST00000544093 TMEM216Q9P0N5 145 aa21.69■■□□□ 1.06
CHFR-222ENST00000544093 SNX6Q9UNH7 406 aa21.69■■□□□ 1.06
CHFR-222ENST00000544093 SLC5A6Q9Y289 635 aa21.69■■□□□ 1.06
CHFR-222ENST00000544093 STK38LQ9Y2H1 464 aa21.69■■□□□ 1.06
CHFR-222ENST00000544093 A0A0A6YYD5 115 aa21.68■■□□□ 1.06
CHFR-222ENST00000544093 MAN1A2O60476 641 aa21.68■■□□□ 1.06
CHFR-222ENST00000544093 LDB3O75112 727 aa21.68■■□□□ 1.06
CHFR-222ENST00000544093 NEURL1O76050 574 aa21.68■■□□□ 1.06
CHFR-222ENST00000544093 SP1P08047 785 aa21.68■■□□□ 1.06
CHFR-222ENST00000544093 TNNI3P19429 210 aa21.68■■□□□ 1.06
CHFR-222ENST00000544093 ATP5F1P24539 256 aaPredicted RBP21.68■■□□□ 1.06
CHFR-222ENST00000544093 HLCSP50747 726 aa21.68■■□□□ 1.06
CHFR-222ENST00000544093 NEK2P51955 445 aa21.68■■□□□ 1.06
CHFR-222ENST00000544093 IGLV3-21P80748 117 aaPredicted RBP21.68■■□□□ 1.06
CHFR-222ENST00000544093 SPINK14Q6IE38 97 aa21.68■■□□□ 1.06
CHFR-222ENST00000544093 SLC25A25Q6KCM7 469 aa21.68■■□□□ 1.06
CHFR-222ENST00000544093 PAGE2Q7Z2X7 111 aa21.68■■□□□ 1.06
CHFR-222ENST00000544093 OR4F6Q8NGB9 312 aa21.68■■□□□ 1.06
CHFR-222ENST00000544093 OR8K3Q8NH51 312 aa21.68■■□□□ 1.06
CHFR-222ENST00000544093 PTPMT1Q8WUK0 201 aaPredicted RBP21.68■■□□□ 1.06
CHFR-222ENST00000544093 PELOQ9BRX2 385 aaKnown RBP21.68■■□□□ 1.06
CHFR-222ENST00000544093 SORBS1Q9BX66 1292 aaKnown RBP21.68■■□□□ 1.06
CHFR-222ENST00000544093 ZNF717Q9BY31 904 aaPredicted RBP21.68■■□□□ 1.06
CHFR-222ENST00000544093 NMRK1Q9NWW6 199 aa21.68■■□□□ 1.06
CHFR-222ENST00000544093 TBK1Q9UHD2 729 aa21.68■■□□□ 1.06
CHFR-222ENST00000544093 ADAM29Q9UKF5 820 aa21.68■■□□□ 1.06
CHFR-222ENST00000544093 YARS2Q9Y2Z4 477 aaKnown RBP21.68■■□□□ 1.06
CHFR-222ENST00000544093 C17orf105B2RV13 164 aa21.67■■□□□ 1.06
CHFR-222ENST00000544093 PROM1O43490 865 aa21.67■■□□□ 1.06
CHFR-222ENST00000544093 SEMA7AO75326 666 aa21.67■■□□□ 1.06
CHFR-222ENST00000544093 SLC25A12O75746 678 aa21.67■■□□□ 1.06
CHFR-222ENST00000544093 FAM58BPP0C7Q3 252 aa21.67■■□□□ 1.06
CHFR-222ENST00000544093 BSGP35613 385 aa21.67■■□□□ 1.06
CHFR-222ENST00000544093 STT3AP46977 705 aa21.67■■□□□ 1.06
CHFR-222ENST00000544093 TDGF1P3P51864 188 aa21.67■■□□□ 1.06
CHFR-222ENST00000544093 PLIN5Q00G26 463 aa21.67■■□□□ 1.06
CHFR-222ENST00000544093 RASA2Q15283 850 aa21.67■■□□□ 1.06
CHFR-222ENST00000544093 MRM1Q6IN84 353 aaKnown RBP21.67■■□□□ 1.06
CHFR-222ENST00000544093 HSDL2Q6YN16 418 aa21.67■■□□□ 1.06
CHFR-222ENST00000544093 TDRPQ86YL5 185 aa21.67■■□□□ 1.06
CHFR-222ENST00000544093 GPALPP1Q8IXQ4 340 aa21.67■■□□□ 1.06
CHFR-222ENST00000544093 TMEM156Q8N614 296 aa21.67■■□□□ 1.06
CHFR-222ENST00000544093 MZB1Q8WU39 189 aa21.67■■□□□ 1.06
CHFR-222ENST00000544093 ANKRD9Q96BM1 317 aaPredicted RBP21.67■■□□□ 1.06
CHFR-222ENST00000544093 CCDC126Q96EE4 140 aa21.67■■□□□ 1.06
CHFR-222ENST00000544093 RBM18Q96H35 190 aaKnown RBP21.67■■□□□ 1.06
CHFR-222ENST00000544093 DGAT2Q96PD7 388 aa21.67■■□□□ 1.06
CHFR-222ENST00000544093 PSMG3-AS1Q96PY0 264 aa21.67■■□□□ 1.06
CHFR-222ENST00000544093 BRF2Q9HAW0 419 aa21.67■■□□□ 1.06
CHFR-222ENST00000544093 COPS7AQ9UBW8 275 aa21.67■■□□□ 1.06
CHFR-222ENST00000544093 TRPS1Q9UHF7 1281 aa21.67■■□□□ 1.06
CHFR-222ENST00000544093 ATG4BQ9Y4P1 393 aa21.67■■□□□ 1.06
CHFR-222ENST00000544093 ITGA10O75578 1167 aa21.66■■□□□ 1.06
CHFR-222ENST00000544093 SUPT7LO94864 414 aa21.66■■□□□ 1.06
CHFR-222ENST00000544093 ETHE1O95571 254 aa21.66■■□□□ 1.06
CHFR-222ENST00000544093 NR2F6P10588 404 aa21.66■■□□□ 1.06
CHFR-222ENST00000544093 PYGBP11216 843 aa21.66■■□□□ 1.06
CHFR-222ENST00000544093 HNRNPH2P55795 449 aaKnown RBP21.66■■□□□ 1.06
CHFR-222ENST00000544093 NAA20P61599 178 aa21.66■■□□□ 1.06
CHFR-222ENST00000544093 CLCQ05315 142 aa21.66■■□□□ 1.06
CHFR-222ENST00000544093 ZNF678Q5SXM1 525 aa21.66■■□□□ 1.06
CHFR-222ENST00000544093 ART5Q96L15 291 aa21.66■■□□□ 1.06
CHFR-222ENST00000544093 KLHL1Q9NR64 748 aa21.66■■□□□ 1.06
CHFR-222ENST00000544093 RYDENQ9NUL5 291 aaKnown RBP21.66■■□□□ 1.06
CHFR-222ENST00000544093 ZNF223Q9UK11 482 aaPredicted RBP21.66■■□□□ 1.06
CHFR-222ENST00000544093 ASB4Q9Y574 426 aa21.66■■□□□ 1.06
CHFR-222ENST00000544093 ARHGAP10A1A4S6 786 aa21.65■■□□□ 1.06
CHFR-222ENST00000544093 ASPDHA6ND91 283 aa21.65■■□□□ 1.06
CHFR-222ENST00000544093 GOLGA8RI6L899 631 aa21.65■■□□□ 1.06
CHFR-222ENST00000544093 FGF17O60258 216 aa21.65■■□□□ 1.06
CHFR-222ENST00000544093 NME2P1O60361 137 aa21.65■■□□□ 1.06
CHFR-222ENST00000544093 GLRA3O75311 464 aa21.65■■□□□ 1.06
CHFR-222ENST00000544093 EEDO75530 441 aaKnown RBP21.65■■□□□ 1.06
CHFR-222ENST00000544093 IMPDH1P20839 514 aa21.65■■□□□ 1.06
CHFR-222ENST00000544093 NME2P22392 152 aa21.65■■□□□ 1.06
CHFR-222ENST00000544093 HSD17B3P37058 310 aa21.65■■□□□ 1.06
CHFR-222ENST00000544093 SSR4P51571 173 aa21.65■■□□□ 1.06
CHFR-222ENST00000544093 CDH13P55290 713 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms