RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 TEX10Q9NXF1 929 aaPredicted RBP5.94□□□□□ -1.46
LTBR-212ENST00000543542 P4HTMQ9NXG6 502 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 KCMF1Q9P0J7 381 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 GIMAP2Q9UG22 337 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 FBXL4Q9UKA2 621 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 G3BP2Q9UN86 482 aaKnown RBP5.94□□□□□ -1.46
LTBR-212ENST00000543542 EIF3LQ9Y262 564 aaKnown RBP5.94□□□□□ -1.46
LTBR-212ENST00000543542 DLGAP4Q9Y2H0 992 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 TMED5Q9Y3A6 229 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 ATG4BQ9Y4P1 393 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 MMACHCQ9Y4U1 282 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 HS3ST3B1Q9Y662 390 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 ZNF780BQ9Y6R6 833 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 IGHV3-20A0A0C4DH32 117 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 GOLGA8QA0A0J9YX86 632 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 A0A1W2PR48 441 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 C1orf226A1L170 272 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 GOLGA8OA6NCC3 632 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 SYNDIG1LA6NDD5 238 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 A6NL46 340 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 GOLGA8NF8WBI6 632 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 CYR61O00622 381 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 SOCS6O14544 535 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 LSM1O15116 133 aaKnown RBP5.93□□□□□ -1.46
LTBR-212ENST00000543542 AKAP10O43572 662 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 DIAPH2O60879 1101 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 CTNSO60931 367 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 SNNO75324 88 aaPredicted RBP5.93□□□□□ -1.46
LTBR-212ENST00000543542 SEC24DO94855 1032 aaPredicted RBP5.93□□□□□ -1.46
LTBR-212ENST00000543542 LRATO95237 230 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 AIFM1O95831 613 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 RECKO95980 971 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 HPP00738 406 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 CYC1P08574 325 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 ALOX15P16050 662 aaPredicted RBP5.93□□□□□ -1.46
LTBR-212ENST00000543542 DDX5P17844 614 aaKnown RBP5.93□□□□□ -1.46
LTBR-212ENST00000543542 LBPP18428 481 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 PRPH2P23942 346 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 ITGA3P26006 1051 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 GSTM5P46439 218 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 CCL11P51671 97 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 PGDP52209 483 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 HNRNPFP52597 415 aaKnown RBP5.93□□□□□ -1.46
LTBR-212ENST00000543542 RAE1P78406 368 aaKnown RBP5.93□□□□□ -1.46
LTBR-212ENST00000543542 OCRLQ01968 901 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 RHAGQ02094 409 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 GUCY1A3Q02108 690 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 FOLH1Q04609 750 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 SERTAD2Q14140 314 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 RPS6KA2Q15349 733 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 BTBD16Q32M84 506 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 RFTN2Q52LD8 501 aaPredicted RBP5.93□□□□□ -1.46
LTBR-212ENST00000543542 CRTC2Q53ET0 693 aaPredicted RBP5.93□□□□□ -1.46
LTBR-212ENST00000543542 MRM1Q6IN84 353 aaKnown RBP5.93□□□□□ -1.46
LTBR-212ENST00000543542 BORAQ6PGQ7 559 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 PAPD4Q6PIY7 484 aaKnown RBP5.93□□□□□ -1.46
LTBR-212ENST00000543542 ATG14Q6ZNE5 492 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 RIPOR1Q6ZS17 1223 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 RNF165Q6ZSG1 346 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 Q6ZSR9 355 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 MED25Q71SY5 747 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 NDUFAF7Q7L592 441 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 PPP1R32Q7Z5V6 425 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 ANKRD37Q7Z713 158 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 TMEM151BQ8IW70 566 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 PARP9Q8IXQ6 854 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 LIX1Q8N485 282 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 TMEM102Q8N9M5 508 aaPredicted RBP5.93□□□□□ -1.46
LTBR-212ENST00000543542 TMEM52Q8NDY8 209 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 OR4K14Q8NGD5 310 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 OR2T11Q8NH01 316 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 CLHC1Q8NHS4 586 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 APOBEC4Q8WW27 367 aaKnown RBP5.93□□□□□ -1.46
LTBR-212ENST00000543542 GFM2Q969S9 779 aaKnown RBP5.93□□□□□ -1.46
LTBR-212ENST00000543542 EXOSC8Q96B26 276 aaKnown RBP5.93□□□□□ -1.46
LTBR-212ENST00000543542 NACC2Q96BF6 587 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 TM4SF18Q96CE8 201 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 KLHL29Q96CT2 875 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 THOC1Q96FV9 657 aaKnown RBP5.93□□□□□ -1.46
LTBR-212ENST00000543542 RBM18Q96H35 190 aaKnown RBP5.93□□□□□ -1.46
LTBR-212ENST00000543542 CRELD1Q96HD1 420 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 METTL2AQ96IZ6 378 aaKnown RBP5.93□□□□□ -1.46
LTBR-212ENST00000543542 C3orf30Q96M34 536 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 C7orf26Q96N11 449 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 TSSK3Q96PN8 268 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 BBS4Q96RK4 519 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 PELOQ9BRX2 385 aaKnown RBP5.93□□□□□ -1.46
LTBR-212ENST00000543542 TUBB6Q9BUF5 446 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 ZNF717Q9BY31 904 aaPredicted RBP5.93□□□□□ -1.46
LTBR-212ENST00000543542 ING2Q9H160 280 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 AKTIPQ9H8T0 292 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 SLCO1B3Q9NPD5 702 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 ATP13A2Q9NQ11 1180 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 NOP53Q9NZM5 478 aaKnown RBP5.93□□□□□ -1.46
LTBR-212ENST00000543542 UTS2RQ9UKP6 389 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 ENTPD4Q9Y227 616 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 ASB4Q9Y574 426 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 PCDHA9Q9Y5H5 950 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 CLCA3PQ9Y6N3 262 aa5.93□□□□□ -1.46
LTBR-212ENST00000543542 USH1CQ9Y6N9 552 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms