RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 KCT2Q8NC54 265 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 CAMKVQ8NCB2 501 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 ZBTB44Q8NCP5 570 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 OR8J3Q8NGG0 315 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 CEP76Q8TAP6 659 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 CYGBQ8WWM9 190 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 GAL3ST3Q96A11 431 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 TM4SF19Q96DZ7 209 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 AURKBQ96GD4 344 aaPredicted RBP8.24□□□□□ -1.09
THBS3-210ENST00000541576 PANX1Q96RD7 426 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 BHLHE41Q9C0J9 482 aaPredicted RBP8.24□□□□□ -1.09
THBS3-210ENST00000541576 NDEL1Q9GZM8 345 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 PRDM7Q9NQW5 492 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 UNC13CQ8NB66 2214 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 CACNA1HO95180 2353 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 LOC105369274A0A096LPK9 316 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 LOC102723532A0A0G2JNH3 316 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 TMEM247A6NEH6 219 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 H0YGG7 62 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 MT-ND1P03886 318 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 HOXB9P17482 250 aaPredicted RBP8.24□□□□□ -1.09
THBS3-210ENST00000541576 TSFMP43897 325 aaKnown RBP8.24□□□□□ -1.09
THBS3-210ENST00000541576 TRPC1P48995 793 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 ARF3P61204 181 aaPredicted RBP8.24□□□□□ -1.09
THBS3-210ENST00000541576 TRA2BP62995 288 aaKnown RBP8.24□□□□□ -1.09
THBS3-210ENST00000541576 SNRPNP63162 240 aaKnown RBP8.24□□□□□ -1.09
THBS3-210ENST00000541576 SLC9A5Q14940 896 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 HEPACAMQ14CZ8 416 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 ANGPT1Q15389 498 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 FAM92BQ6ZTR7 304 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 GPR141Q7Z602 305 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 TICAM1Q8IUC6 712 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 CLECL1Q8IZS7 167 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 OR4N4Q8N0Y3 316 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 C19orf47Q8N9M1 422 aaKnown RBP8.24□□□□□ -1.09
THBS3-210ENST00000541576 OR8K5Q8NH50 307 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 JADE3Q92613 823 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 DUSP23Q9BVJ7 150 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 ALG2Q9H553 416 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 TIMMDC1Q9NPL8 285 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 C1GALT1Q9NS00 363 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 NLGN3Q9NZ94 848 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 EGFL7Q9UHF1 273 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 BCAP29Q9UHQ4 241 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 GPR179Q6PRD1 2367 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 URADA6NGE7 173 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 SLC9B1P1A6NJY1 282 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 P2RX6O15547 441 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 CPSF4O95639 269 aaKnown RBP8.24□□□□□ -1.09
THBS3-210ENST00000541576 EIF2S1P05198 315 aaKnown RBP8.24□□□□□ -1.09
THBS3-210ENST00000541576 ALPPL2P10696 532 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 GLB1P16278 677 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 DDCP20711 480 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 CD247P20963 164 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 ATP5A1P25705 553 aaKnown RBP8.24□□□□□ -1.09
THBS3-210ENST00000541576 EEFSECP57772 596 aaKnown RBP8.24□□□□□ -1.09
THBS3-210ENST00000541576 ESRRGP62508 458 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 MPEG1Q2M385 716 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 RUNDC3AQ59EK9 446 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 ZCCHC8Q6NZY4 707 aaKnown RBP8.24□□□□□ -1.09
THBS3-210ENST00000541576 DGLUCYQ7Z3D6 616 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 ZNF655Q8N720 491 aaPredicted RBP8.24□□□□□ -1.09
THBS3-210ENST00000541576 ACOT4Q8N9L9 421 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 FAM110BQ8TC76 370 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 SAP25Q8TEE9 199 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 C12orf43Q96C57 262 aaKnown RBP8.24□□□□□ -1.09
THBS3-210ENST00000541576 AHCYL2Q96HN2 611 aaKnown RBP8.24□□□□□ -1.09
THBS3-210ENST00000541576 CCDC115Q96NT0 180 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 MAP3K3Q99759 626 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 SH3GL1Q99961 368 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 CCDC3Q9BQI4 270 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 GAREM1Q9H706 876 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 CAPN10Q9HC96 672 aa8.24□□□□□ -1.09
THBS3-210ENST00000541576 RP1P56715 2156 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 PATE3B3GLJ2 98 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 RNASET2O00584 256 aaKnown RBP8.23□□□□□ -1.09
THBS3-210ENST00000541576 YKT6O15498 198 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 SH3BP5O60239 455 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 TIPRLO75663 272 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 GNAO1P09471 354 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 ZNF888P0CJ79 500 aaPredicted RBP8.23□□□□□ -1.09
THBS3-210ENST00000541576 CERS1P27544 350 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 ALDH9A1P49189 494 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 HNRNPFP52597 415 aaKnown RBP8.23□□□□□ -1.09
THBS3-210ENST00000541576 GFERP55789 205 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 OR1D5P58170 312 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 OR4D2P58180 307 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 LRRC74AQ0VAA2 488 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 TRAP1Q12931 704 aaKnown RBP8.23□□□□□ -1.09
THBS3-210ENST00000541576 SLAMF1Q13291 335 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 COL9A2Q14055 689 aaPredicted RBP8.23□□□□□ -1.09
THBS3-210ENST00000541576 LPAL2Q16609 132 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 TRIM61Q5EBN2 209 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 FGD3Q5JSP0 725 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 NKAIN2Q5VXU1 208 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 KANSL1Q7Z3B3 1105 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 C10orf111Q8N326 155 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 ZCCHC7Q8N3Z6 543 aaKnown RBP8.23□□□□□ -1.09
THBS3-210ENST00000541576 UTP15Q8TED0 518 aaKnown RBP8.23□□□□□ -1.09
THBS3-210ENST00000541576 UCN3Q969E3 161 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms