RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 IKBIPQ70UQ0 350 aa17.63■□□□□ 0.41
VPS33A-205ENST00000541169 HPS6Q86YV9 775 aa17.63■□□□□ 0.41
VPS33A-205ENST00000541169 LRRC8CQ8TDW0 803 aa17.63■□□□□ 0.41
VPS33A-205ENST00000541169 TTC9Q92623 222 aa17.63■□□□□ 0.41
VPS33A-205ENST00000541169 SORBS1Q9BX66 1292 aaKnown RBP17.63■□□□□ 0.41
VPS33A-205ENST00000541169 RBCK1Q9BYM8 510 aa17.63■□□□□ 0.41
VPS33A-205ENST00000541169 LRTM1Q9HBL6 345 aa17.63■□□□□ 0.41
VPS33A-205ENST00000541169 VTI1BQ9UEU0 232 aa17.63■□□□□ 0.41
VPS33A-205ENST00000541169 FIS1Q9Y3D6 152 aa17.63■□□□□ 0.41
VPS33A-205ENST00000541169 CCL27Q9Y4X3 112 aa17.63■□□□□ 0.41
VPS33A-205ENST00000541169 PCDHGA9Q9Y5G4 932 aaKnown RBP17.63■□□□□ 0.41
VPS33A-205ENST00000541169 ARGFXA6NJG6 315 aa17.62■□□□□ 0.41
VPS33A-205ENST00000541169 ITM2AO43736 263 aa17.62■□□□□ 0.41
VPS33A-205ENST00000541169 DYRK3O43781 588 aa17.62■□□□□ 0.41
VPS33A-205ENST00000541169 ALPPP05187 535 aa17.62■□□□□ 0.41
VPS33A-205ENST00000541169 ANXA4P09525 319 aaPredicted RBP17.62■□□□□ 0.41
VPS33A-205ENST00000541169 LINC00032P0C843 101 aa17.62■□□□□ 0.41
VPS33A-205ENST00000541169 COX7A2P14406 83 aa17.62■□□□□ 0.41
VPS33A-205ENST00000541169 DDX5P17844 614 aaKnown RBP17.62■□□□□ 0.41
VPS33A-205ENST00000541169 ARRB2P32121 409 aa17.62■□□□□ 0.41
VPS33A-205ENST00000541169 HNRNPH2P55795 449 aaKnown RBP17.62■□□□□ 0.41
VPS33A-205ENST00000541169 ZNF763Q0D2J5 394 aa17.62■□□□□ 0.41
VPS33A-205ENST00000541169 NR6A1Q15406 480 aa17.62■□□□□ 0.41
VPS33A-205ENST00000541169 ATP6AP1LQ52LC2 224 aa17.62■□□□□ 0.41
VPS33A-205ENST00000541169 NDUFAF5Q5TEU4 345 aa17.62■□□□□ 0.41
VPS33A-205ENST00000541169 PLAG1Q6DJT9 500 aa17.62■□□□□ 0.41
VPS33A-205ENST00000541169 KBTBD2Q8IY47 623 aa17.62■□□□□ 0.41
VPS33A-205ENST00000541169 SORT1Q99523 831 aa17.62■□□□□ 0.41
VPS33A-205ENST00000541169 ADAP2Q9NPF8 381 aa17.62■□□□□ 0.41
VPS33A-205ENST00000541169 EHD3Q9NZN3 535 aa17.62■□□□□ 0.41
VPS33A-205ENST00000541169 CELSR3Q9NYQ7 3312 aa17.62■□□□□ 0.41
VPS33A-205ENST00000541169 A0A1W2PR48 441 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 TRPC5OSA6NMA1 111 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 PIP5K1BO14986 540 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 CEACAM4O75871 244 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 GPR75O95800 540 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 SERPINA7P05543 415 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 CHN1P15882 459 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 MAOAP21397 527 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 GALNSP34059 522 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 POLE2P56282 527 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 BTG2P78543 158 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 IGLV3-21P80748 117 aaPredicted RBP17.61■□□□□ 0.41
VPS33A-205ENST00000541169 ELAVL1Q15717 326 aaKnown RBP17.61■□□□□ 0.41
VPS33A-205ENST00000541169 SFT2D3Q587I9 215 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 XKR7Q5GH72 579 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 FAAH2Q6GMR7 532 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 SCIMPQ6UWF3 145 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 FAM9CQ8IZT9 166 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 TMEM132CQ8N3T6 1108 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 ZNF781Q8N8C0 355 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 M1APQ8TC57 530 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 AGR3Q8TD06 166 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 ZNF75CPQ92670 426 aaPredicted RBP17.61■□□□□ 0.41
VPS33A-205ENST00000541169 DAZLQ92904 295 aaKnown RBP17.61■□□□□ 0.41
VPS33A-205ENST00000541169 EXTL1Q92935 676 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 C19orf60Q96EN9 201 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 APIPQ96GX9 242 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 RBM18Q96H35 190 aaKnown RBP17.61■□□□□ 0.41
VPS33A-205ENST00000541169 IMMP1LQ96LU5 166 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 CSF3RQ99062 836 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 TUBB1Q9H4B7 451 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 RYDENQ9NUL5 291 aaKnown RBP17.61■□□□□ 0.41
VPS33A-205ENST00000541169 PCDHA9Q9Y5H5 950 aa17.61■□□□□ 0.41
VPS33A-205ENST00000541169 ZZEF1O43149 2961 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 CDK2AP1O14519 115 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 LSM1O15116 133 aaKnown RBP17.6■□□□□ 0.41
VPS33A-205ENST00000541169 LYPLA1O75608 230 aaPredicted RBP17.6■□□□□ 0.41
VPS33A-205ENST00000541169 AIFM1O95831 613 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 GBAP04062 536 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 PIK3R1P27986 724 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 FOXL2P58012 376 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 PLIN5Q00G26 463 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 OCRLQ01968 901 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 KIAA0040Q15053 153 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 PCOLCEQ15113 449 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 NOXRED1Q6NXP6 359 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 Q6ZSR9 355 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 GALNT16Q8N428 558 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 OR4K14Q8NGD5 310 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 C8orf44Q96CB5 159 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 TM4SF18Q96CE8 201 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 CRELD1Q96HD1 420 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 C7orf26Q96N11 449 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 ALOXE3Q9BYJ1 711 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 C20orf27Q9GZN8 174 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 LHPPQ9H008 270 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 MYNNQ9NPC7 610 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 NECTIN3Q9NQS3 549 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 PPIEQ9UNP9 301 aaKnown RBP17.6■□□□□ 0.41
VPS33A-205ENST00000541169 MAPRE3Q9UPY8 281 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 CLCA3PQ9Y6N3 262 aa17.6■□□□□ 0.41
VPS33A-205ENST00000541169 DSPP15924 2871 aaKnown RBP17.6■□□□□ 0.41
VPS33A-205ENST00000541169 SAGE2PA6NJ88 616 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 TMEM233B4DJY2 109 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 HDAC3O15379 428 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 ASMTP46597 345 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 RAE1P78406 368 aaKnown RBP17.59■□□□□ 0.41
VPS33A-205ENST00000541169 BTKQ06187 659 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 MYBPC3Q14896 1274 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms