RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 CLHC1Q8NHS4 586 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 VPS33AQ96AX1 596 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 TESCQ96BS2 214 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 CLIP3Q96DZ5 547 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 EGLN2Q96KS0 407 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 TSSK3Q96PN8 268 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 GPATCH1Q9BRR8 931 aaKnown RBP10.02□□□□□ -0.81
ATL3-204ENST00000540699 SLC6A16Q9GZN6 736 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 AKIRIN1Q9H9L7 192 aaPredicted RBP10.02□□□□□ -0.81
ATL3-204ENST00000540699 LHX9Q9NQ69 397 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 STARD5Q9NSY2 213 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 CUTCQ9NTM9 273 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 NDE1Q9NXR1 346 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 MCM8Q9UJA3 840 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 LEF1Q9UJU2 399 aaPredicted RBP10.02□□□□□ -0.81
ATL3-204ENST00000540699 PRPF19Q9UMS4 504 aaKnown RBP10.02□□□□□ -0.81
ATL3-204ENST00000540699 PCDHGA6Q9Y5G7 932 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 LOC101059948A0A1B0GTJ6 334 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 CCDC154A6NI56 674 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 C21orf140B9A014 251 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 ANGPT2O15123 496 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 CFLARO15519 480 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 NDUFS4O43181 175 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 KLK10O43240 276 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 MYO1DO94832 1006 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 EIF2S1P05198 315 aaKnown RBP10.01□□□□□ -0.81
ATL3-204ENST00000540699 IL6P05231 212 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 KLK3P07288 261 aaPredicted RBP10.01□□□□□ -0.81
ATL3-204ENST00000540699 RAB40ALP0C0E4 278 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 SLC35G6P0C7Q6 338 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 CCNYL3P0C7X3 344 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 SMIM10L1P0DMW3 83 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 PRPS1L1P21108 318 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 TPP2P29144 1249 aaPredicted RBP10.01□□□□□ -0.81
ATL3-204ENST00000540699 HNRNPH1P31943 449 aaKnown RBP10.01□□□□□ -0.81
ATL3-204ENST00000540699 BSGP35613 385 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 DGKQP52824 942 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 TMPRSS3P57727 454 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 PSME3P61289 254 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 PHC1P78364 1004 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 ELF3P78545 371 aaPredicted RBP10.01□□□□□ -0.81
ATL3-204ENST00000540699 ART3Q13508 389 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 UGT8Q16880 541 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 MMEL1Q495T6 779 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 PAGE3Q5JUK9 113 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 SPANXN4Q5MJ08 99 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 PRMT9Q6P2P2 845 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 FAM198BQ6UWH4 519 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 TTLL10Q6ZVT0 673 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 CAMKMTQ7Z624 323 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 UBE3DQ7Z6J8 389 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 ULK2Q8IYT8 1036 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 ARHGAP24Q8N264 748 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 PCYOX1LQ8NBM8 494 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 CT55Q8WUE5 264 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 SLC13A3Q8WWT9 602 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 MCUR1Q96AQ8 359 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 ROPN1LQ96C74 230 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 SMIM10Q96HG1 83 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 CLPTM1LQ96KA5 538 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 F2RL3Q96RI0 385 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 ZBTB18Q99592 522 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 C17orf62Q9BQA9 187 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 THTPAQ9BU02 230 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 NLNQ9BYT8 704 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 CHST8Q9H2A9 424 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 WDR41Q9HAD4 459 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 CPNE5Q9HCH3 593 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 SLC22A11Q9NSA0 550 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 IRAK4Q9NWZ3 460 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 DHCR7Q9UBM7 475 aaKnown RBP10.01□□□□□ -0.81
ATL3-204ENST00000540699 ADAM29Q9UKF5 820 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 EXO1Q9UQ84 846 aaKnown RBP10.01□□□□□ -0.81
ATL3-204ENST00000540699 MRPS2Q9Y399 296 aaKnown RBP10.01□□□□□ -0.81
ATL3-204ENST00000540699 SLC22A7Q9Y694 548 aa10.01□□□□□ -0.81
ATL3-204ENST00000540699 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.01□□□□□ -0.81
ATL3-204ENST00000540699 MYO18BQ8IUG5 2567 aa10□□□□□ -0.81
ATL3-204ENST00000540699 LRIT2A6NDA9 550 aa10□□□□□ -0.81
ATL3-204ENST00000540699 A8MUI8 341 aa10□□□□□ -0.81
ATL3-204ENST00000540699 C4orf51C9J302 202 aa10□□□□□ -0.81
ATL3-204ENST00000540699 J3QKU1 62 aa10□□□□□ -0.81
ATL3-204ENST00000540699 ERVH48-1M5A8F1 160 aa10□□□□□ -0.81
ATL3-204ENST00000540699 SAP18O00422 153 aaKnown RBP10□□□□□ -0.81
ATL3-204ENST00000540699 FOXS1O43638 330 aa10□□□□□ -0.81
ATL3-204ENST00000540699 RECKO95980 971 aa10□□□□□ -0.81
ATL3-204ENST00000540699 PGRP06401 933 aa10□□□□□ -0.81
ATL3-204ENST00000540699 ANXA4P09525 319 aaPredicted RBP10□□□□□ -0.81
ATL3-204ENST00000540699 LIFP15018 202 aa10□□□□□ -0.81
ATL3-204ENST00000540699 AGXTP21549 392 aa10□□□□□ -0.81
ATL3-204ENST00000540699 F8A1P23610 371 aa10□□□□□ -0.81
ATL3-204ENST00000540699 ASMTP46597 345 aa10□□□□□ -0.81
ATL3-204ENST00000540699 HNRNPFP52597 415 aaKnown RBP10□□□□□ -0.81
ATL3-204ENST00000540699 ARFIP1P53367 373 aa10□□□□□ -0.81
ATL3-204ENST00000540699 UCNP55089 124 aa10□□□□□ -0.81
ATL3-204ENST00000540699 MTTPP55157 894 aa10□□□□□ -0.81
ATL3-204ENST00000540699 SNRPNP63162 240 aaKnown RBP10□□□□□ -0.81
ATL3-204ENST00000540699 DCDP81605 110 aaKnown RBP10□□□□□ -0.81
ATL3-204ENST00000540699 ZNF763Q0D2J5 394 aa10□□□□□ -0.81
ATL3-204ENST00000540699 DNASE1L3Q13609 305 aa10□□□□□ -0.81
ATL3-204ENST00000540699 NDUFA9Q16795 377 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms