RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 TAOK1Q7L7X3 1001 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 SPPL2CQ8IUH8 684 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 CTAGE4Q8IX94 777 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 GHDCQ8N2G8 530 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 RNF175Q8N4F7 328 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 ITLN2Q8WWU7 325 aaPredicted RBP19.5■□□□□ 0.71
CHFR-217ENST00000540537 IFT81Q8WYA0 676 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 ANKRD9Q96BM1 317 aaPredicted RBP19.5■□□□□ 0.71
CHFR-217ENST00000540537 PAFAH2Q99487 392 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 MTERF1Q99551 399 aaKnown RBP19.5■□□□□ 0.71
CHFR-217ENST00000540537 SH3BGRL2Q9UJC5 107 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 IKBKGQ9Y6K9 419 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 MYOCOSA0A1B0GUC4 107 aa19.49■□□□□ 0.71
CHFR-217ENST00000540537 PLPP1O14494 284 aa19.49■□□□□ 0.71
CHFR-217ENST00000540537 TUBB4AP04350 444 aa19.49■□□□□ 0.71
CHFR-217ENST00000540537 RBP1P09455 135 aa19.49■□□□□ 0.71
CHFR-217ENST00000540537 ECHS1P30084 290 aa19.49■□□□□ 0.71
CHFR-217ENST00000540537 MEOX1P50221 254 aa19.49■□□□□ 0.71
CHFR-217ENST00000540537 IGLV3-21P80748 117 aaPredicted RBP19.49■□□□□ 0.71
CHFR-217ENST00000540537 SLAMF1Q13291 335 aa19.49■□□□□ 0.71
CHFR-217ENST00000540537 ART3Q13508 389 aa19.49■□□□□ 0.71
CHFR-217ENST00000540537 SULF2Q8IWU5 870 aa19.49■□□□□ 0.71
CHFR-217ENST00000540537 PLD6Q8N2A8 252 aaKnown RBP19.49■□□□□ 0.71
CHFR-217ENST00000540537 ZCCHC7Q8N3Z6 543 aaKnown RBP19.49■□□□□ 0.71
CHFR-217ENST00000540537 ZNF808Q8N4W9 903 aaPredicted RBP19.49■□□□□ 0.71
CHFR-217ENST00000540537 L3MBTL4Q8NA19 623 aa19.49■□□□□ 0.71
CHFR-217ENST00000540537 OR8K3Q8NH51 312 aa19.49■□□□□ 0.71
CHFR-217ENST00000540537 SORBS1Q9BX66 1292 aaKnown RBP19.49■□□□□ 0.71
CHFR-217ENST00000540537 OR8D2Q9GZM6 311 aa19.49■□□□□ 0.71
CHFR-217ENST00000540537 IPPKQ9H8X2 491 aa19.49■□□□□ 0.71
CHFR-217ENST00000540537 PSD3Q9NYI0 1048 aa19.49■□□□□ 0.71
CHFR-217ENST00000540537 MYOTQ9UBF9 498 aa19.49■□□□□ 0.71
CHFR-217ENST00000540537 PHF11Q9UIL8 331 aa19.49■□□□□ 0.71
CHFR-217ENST00000540537 TMCO1Q9UM00 188 aa19.49■□□□□ 0.71
CHFR-217ENST00000540537 ENTPD4Q9Y227 616 aa19.49■□□□□ 0.71
CHFR-217ENST00000540537 NCOA6Q14686 2063 aaPredicted RBP19.48■□□□□ 0.71
CHFR-217ENST00000540537 A8MVJ9 347 aa19.48■□□□□ 0.71
CHFR-217ENST00000540537 C17orf105B2RV13 164 aa19.48■□□□□ 0.71
CHFR-217ENST00000540537 PEX1O43933 1283 aa19.48■□□□□ 0.71
CHFR-217ENST00000540537 OR2J2O76002 312 aa19.48■□□□□ 0.71
CHFR-217ENST00000540537 KRT38O76015 456 aa19.48■□□□□ 0.71
CHFR-217ENST00000540537 SIX3O95343 332 aaPredicted RBP19.48■□□□□ 0.71
CHFR-217ENST00000540537 COX7A2P14406 83 aa19.48■□□□□ 0.71
CHFR-217ENST00000540537 TNNI3P19429 210 aa19.48■□□□□ 0.71
CHFR-217ENST00000540537 PTX3P26022 381 aaPredicted RBP19.48■□□□□ 0.71
CHFR-217ENST00000540537 RPS13P62277 151 aaKnown RBP19.48■□□□□ 0.71
CHFR-217ENST00000540537 ID2Q02363 134 aa19.48■□□□□ 0.71
CHFR-217ENST00000540537 BIKQ13323 160 aa19.48■□□□□ 0.71
CHFR-217ENST00000540537 MDGA2Q7Z553 956 aa19.48■□□□□ 0.71
CHFR-217ENST00000540537 SLC2A12Q8TD20 617 aa19.48■□□□□ 0.71
CHFR-217ENST00000540537 ASB15Q8WXK1 588 aa19.48■□□□□ 0.71
CHFR-217ENST00000540537 TIMMDC1Q9NPL8 285 aa19.48■□□□□ 0.71
CHFR-217ENST00000540537 HPF1Q9NWY4 346 aa19.48■□□□□ 0.71
CHFR-217ENST00000540537 TINAGQ9UJW2 476 aa19.48■□□□□ 0.71
CHFR-217ENST00000540537 ZNF180Q9UJW8 692 aa19.48■□□□□ 0.71
CHFR-217ENST00000540537 KLF2Q9Y5W3 355 aaPredicted RBP19.48■□□□□ 0.71
CHFR-217ENST00000540537 PRSS44E7EML9 344 aa19.47■□□□□ 0.71
CHFR-217ENST00000540537 FGF17O60258 216 aa19.47■□□□□ 0.71
CHFR-217ENST00000540537 COL6A2P12110 1019 aa19.47■□□□□ 0.71
CHFR-217ENST00000540537 CNTFP26441 200 aa19.47■□□□□ 0.71
CHFR-217ENST00000540537 STT3AP46977 705 aa19.47■□□□□ 0.71
CHFR-217ENST00000540537 TNFRSF17Q02223 184 aa19.47■□□□□ 0.71
CHFR-217ENST00000540537 CUL3Q13618 768 aa19.47■□□□□ 0.71
CHFR-217ENST00000540537 CPSF6Q16630 551 aaKnown RBP eCLIP19.47■□□□□ 0.71
CHFR-217ENST00000540537 TSNAXIP1Q2TAA8 658 aa19.47■□□□□ 0.71
CHFR-217ENST00000540537 BNC2Q6ZN30 1099 aaPredicted RBP19.47■□□□□ 0.71
CHFR-217ENST00000540537 C16orf47Q6ZP98 133 aaPredicted RBP19.47■□□□□ 0.71
CHFR-217ENST00000540537 MRGPRGQ86SM5 289 aa19.47■□□□□ 0.71
CHFR-217ENST00000540537 GPR180Q86V85 440 aa19.47■□□□□ 0.71
CHFR-217ENST00000540537 CHERPQ8IWX8 916 aaKnown RBP19.47■□□□□ 0.71
CHFR-217ENST00000540537 PTGR2Q8N8N7 351 aaPredicted RBP19.47■□□□□ 0.71
CHFR-217ENST00000540537 ZFP62Q8NB50 900 aaPredicted RBP19.47■□□□□ 0.71
CHFR-217ENST00000540537 OR5L2Q8NGL0 311 aa19.47■□□□□ 0.71
CHFR-217ENST00000540537 WDR20Q8TBZ3 569 aa19.47■□□□□ 0.71
CHFR-217ENST00000540537 TANKQ92844 425 aa19.47■□□□□ 0.71
CHFR-217ENST00000540537 RASL10BQ96S79 203 aa19.47■□□□□ 0.71
CHFR-217ENST00000540537 ZNF717Q9BY31 904 aaPredicted RBP19.47■□□□□ 0.71
CHFR-217ENST00000540537 RPF2Q9H7B2 306 aaKnown RBP19.47■□□□□ 0.71
CHFR-217ENST00000540537 LIN28AQ9H9Z2 209 aaKnown RBP19.47■□□□□ 0.71
CHFR-217ENST00000540537 ZNF358Q9NW07 568 aa19.47■□□□□ 0.71
CHFR-217ENST00000540537 LYARQ9NX58 379 aaKnown RBP19.47■□□□□ 0.71
CHFR-217ENST00000540537 COPS7AQ9UBW8 275 aa19.47■□□□□ 0.71
CHFR-217ENST00000540537 PPT2Q9UMR5 302 aa19.47■□□□□ 0.71
CHFR-217ENST00000540537 ERVK-11Q9UQG0 969 aa19.47■□□□□ 0.71
CHFR-217ENST00000540537 RNF11Q9Y3C5 154 aa19.47■□□□□ 0.71
CHFR-217ENST00000540537 STX16-NPEPL1H3BU86 382 aa19.46■□□□□ 0.71
CHFR-217ENST00000540537 KIF2AO00139 706 aaPredicted RBP19.46■□□□□ 0.71
CHFR-217ENST00000540537 WWP2O00308 870 aa19.46■□□□□ 0.71
CHFR-217ENST00000540537 FOXE1O00358 373 aaPredicted RBP19.46■□□□□ 0.71
CHFR-217ENST00000540537 STX16O14662 325 aa19.46■□□□□ 0.71
CHFR-217ENST00000540537 TFECO14948 347 aaPredicted RBP19.46■□□□□ 0.71
CHFR-217ENST00000540537 CLDN9O95484 217 aa19.46■□□□□ 0.71
CHFR-217ENST00000540537 ESRRAP11474 423 aaPredicted RBP19.46■□□□□ 0.71
CHFR-217ENST00000540537 ABOP16442 354 aa19.46■□□□□ 0.71
CHFR-217ENST00000540537 TLX1P31314 330 aaPredicted RBP19.46■□□□□ 0.71
CHFR-217ENST00000540537 HK2P52789 917 aa19.46■□□□□ 0.71
CHFR-217ENST00000540537 HNRNPH2P55795 449 aaKnown RBP19.46■□□□□ 0.71
CHFR-217ENST00000540537 RNF4P78317 190 aa19.46■□□□□ 0.71
CHFR-217ENST00000540537 ZNF321PQ8N8H1 164 aa19.46■□□□□ 0.71
CHFR-217ENST00000540537 PSD4Q8NDX1 1056 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms