RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 TMEM216Q9P0N5 145 aa8.29□□□□□ -1.08
TRAPPC1-202ENST00000540486 TRPS1Q9UHF7 1281 aa8.29□□□□□ -1.08
TRAPPC1-202ENST00000540486 ZNF490Q9ULM2 529 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC1-202ENST00000540486 RUVBL1Q9Y265 456 aaKnown RBP8.29□□□□□ -1.08
TRAPPC1-202ENST00000540486 IQANK1A0A1B0GTG1 560 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 A0A1W2PQ72 361 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 TRBC2A0A5B9 178 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 CCDC189A1A4V9 331 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 SERTM1A2A2V5 107 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 SUPT3HB4E1H0 165 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 GOLGA8RI6L899 631 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 DSCR3O14972 297 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 OR1F1O43749 312 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 CCNT2O60583 730 aaKnown RBP8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 DNAJB6O75190 326 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 SUPT3HO75486 399 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 RBP1P09455 135 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 NUDT17P0C025 328 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 COX6A1P12074 109 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 CD22P20273 847 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 PTGS2P35354 604 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 SLCO1A2P46721 670 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 DLX5P56178 289 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 RPS15AP62244 130 aaKnown RBP8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 PCDH1Q08174 1060 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 HYAL2Q12891 473 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 E2F2Q14209 437 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 SETDB1Q15047 1291 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 RASA2Q15283 850 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 PCBP2Q15366 365 aaKnown RBP eCLIP8.28□□□□□ -1.085e-7■■■■■ 27.5
TRAPPC1-202ENST00000540486 EMBQ6PCB8 327 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 SHISA6Q6ZSJ9 500 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 COX15Q7KZN9 410 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 TMPRSS11BQ86T26 416 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 TDRPQ86YL5 185 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 VWA5B2Q8N398 1253 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 TMEM178AQ8NBL3 297 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 KCT2Q8NC54 265 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 EPS8L3Q8TE67 593 aaKnown RBP8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 SLC13A3Q8WWT9 602 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 CAVIN3Q969G5 261 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 MTBPQ96DY7 904 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 ZNF837Q96EG3 531 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 FRMD6Q96NE9 622 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 AICDAQ9GZX7 198 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 TP63Q9H3D4 680 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 PELI2Q9HAT8 420 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 DNAJC11Q9NVH1 559 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 RIC8BQ9NVN3 520 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 GPRC5BQ9NZH0 403 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 NUDT4Q9NZJ9 180 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 MAU2Q9Y6X3 613 aa8.28□□□□□ -1.08
TRAPPC1-202ENST00000540486 SONP18583 2426 aaKnown RBP8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 ZNHIT1O43257 154 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 SIX3O95343 332 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 TBX6O95947 436 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 SMIM10L1P0DMW3 83 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 GNAZP19086 355 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 CXCR2P25025 360 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 GRK3P35626 688 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 CASP2P42575 452 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 ALDH18A1P54886 795 aaKnown RBP8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 DCAF7P61962 342 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 HSF1Q00613 529 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 REEP5Q00765 189 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 OCA2Q04671 838 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 ZNF33BQ06732 778 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 KLC1Q07866 573 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 FAM53BQ14153 422 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 DOC2AQ14183 400 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 DAZAP2Q15038 168 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 RBBP5Q15291 538 aaKnown RBP8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 PFKFB4Q16877 469 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 TSNAXIP1Q2TAA8 658 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 MUM1Q2TAK8 710 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 GARNL3Q5VVW2 1013 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 ADNP2Q6IQ32 1131 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 KLC3Q6P597 504 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 PRSS57Q6UWY2 283 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 PRSS41Q7RTY9 318 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 VN1R5Q7Z5H4 357 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 FGD2Q7Z6J4 655 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 ASPGQ86U10 573 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 CD163Q86VB7 1156 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 CCDC71Q8IV32 467 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 LRRC75A-AS1Q8N1F1 130 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 METTL27Q8N6F8 245 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 TTC29Q8NA56 475 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 ACMSDQ8TDX5 336 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 CREB3L4Q8TEY5 395 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 UBTD2Q8WUN7 234 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 RERGQ96A58 199 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 MIEF2Q96C03 454 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 C8orf44Q96CB5 159 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 PHF21BQ96EK2 531 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 WDR34Q96EX3 536 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 SCMH1Q96GD3 660 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 SMIM10Q96HG1 83 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 SEC16BQ96JE7 1060 aa8.27□□□□□ -1.09
TRAPPC1-202ENST00000540486 CABS1Q96KC9 395 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms