RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 KLBQ86Z14 1044 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 OR2T11Q8NH01 316 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 NFKBIDQ8NI38 313 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 OCSTAMPQ9BR26 566 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 ZNF251Q9BRH9 671 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 OR11A1Q9GZK7 315 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 C11orf54Q9H0W9 315 aaPredicted RBP8.43□□□□□ -1.06
YBX3-208ENST00000540447 ASB7Q9H672 318 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 NOX3Q9HBY0 568 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 ACOT13Q9NPJ3 140 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 MRTO4Q9UKD2 239 aaKnown RBP8.43□□□□□ -1.06
YBX3-208ENST00000540447 C7orf72A4D263 438 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 HTR1AP08908 422 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 G6PDP11413 515 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 LTKP29376 864 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 GLP1RP43220 463 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 EEF1A1P68104 462 aaKnown RBP8.43□□□□□ -1.06
YBX3-208ENST00000540447 HTD2P86397 168 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 EEF1A2Q05639 463 aaKnown RBP8.43□□□□□ -1.06
YBX3-208ENST00000540447 CDC20Q12834 499 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 APOFQ13790 326 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 TMEM132BQ14DG7 1078 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 PAN2Q504Q3 1202 aaKnown RBP8.43□□□□□ -1.06
YBX3-208ENST00000540447 EEF1A1P5Q5VTE0 462 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 LINC00299Q6ZSB3 139 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 HIST2H3AQ71DI3 136 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 KDM8Q8N371 416 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 OR8J1Q8NGP2 316 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 SORCS1Q8WY21 1168 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 SLC35G5Q96KT7 338 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 USB1Q9BQ65 265 aaKnown RBP8.43□□□□□ -1.06
YBX3-208ENST00000540447 GBA2Q9HCG7 927 aaPredicted RBP8.43□□□□□ -1.06
YBX3-208ENST00000540447 PLSCR3Q9NRY6 295 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 GAR1Q9NY12 217 aaKnown RBP8.43□□□□□ -1.06
YBX3-208ENST00000540447 MYEF2Q9P2K5 600 aaKnown RBP8.43□□□□□ -1.06
YBX3-208ENST00000540447 PURGQ9UJV8 347 aaKnown RBP8.43□□□□□ -1.06
YBX3-208ENST00000540447 NOCTQ9UK39 431 aaKnown RBP8.43□□□□□ -1.06
YBX3-208ENST00000540447 ADAMTS13Q76LX8 1427 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 A0A0U1RQK1 487 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 FAM230AA0A1W2PPH8 454 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 OR10H2O60403 315 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 ATG12O94817 140 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 SLC25A14O95258 325 aaPredicted RBP8.43□□□□□ -1.06
YBX3-208ENST00000540447 IGSF6O95976 241 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 RXRBP28702 533 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 TEKQ02763 1124 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 RASGEF1BQ0VAM2 473 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 DUSP4Q13115 394 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 TMPRSS11BQ86T26 416 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 CYP2W1Q8TAV3 490 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 KLHL15Q96M94 604 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 IL12RB2Q99665 862 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 YIPF4Q9BSR8 244 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 SLC5A7Q9GZV3 580 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 DUSP22Q9NRW4 184 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 OLAHQ9NV23 265 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 RHCGQ9UBD6 479 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 F10P00742 488 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 APOA2P02652 100 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 PTPRAP18433 802 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 ZP3P21754 424 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 MAT2AP31153 395 aaKnown RBP8.43□□□□□ -1.06
YBX3-208ENST00000540447 CRISP1P54107 249 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 CRISP3P54108 245 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 OR4D2P58180 307 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 PCGF3Q3KNV8 242 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 MOB1BQ7L9L4 216 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 ZNF596Q8TC21 504 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 NPRL2Q8WTW4 380 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 PYCR2Q96C36 320 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 OTUB2Q96DC9 234 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 FGFBP2Q9BYJ0 223 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 SLC6A16Q9GZN6 736 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 TMPRSS4Q9NRS4 437 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 SLC6A5Q9Y345 797 aa8.43□□□□□ -1.06
YBX3-208ENST00000540447 AGLP35573 1532 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 CACNG3O60359 315 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 SNNO75324 88 aaPredicted RBP8.42□□□□□ -1.06
YBX3-208ENST00000540447 ACPPP15309 386 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 SERPINA4P29622 427 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 MRPS5P82675 430 aaKnown RBP8.42□□□□□ -1.06
YBX3-208ENST00000540447 CDK6Q00534 326 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 LAMTOR4Q0VGL1 99 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 GRIK5Q16478 980 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 BCL2A1Q16548 175 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 ENPP6Q6UWR7 440 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 ZBTB2Q8N680 514 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 OR56B4Q8NH76 319 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 RNF141Q8WVD5 230 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 OSTF1Q92882 214 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 DCLRE1CQ96SD1 692 aaKnown RBP8.42□□□□□ -1.06
YBX3-208ENST00000540447 TXLNGYQ9BZA5 131 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 AGPAT4Q9NRZ5 378 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 ZNF629Q9UEG4 869 aaPredicted RBP8.42□□□□□ -1.06
YBX3-208ENST00000540447 FBXL2Q9UKC9 423 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 MEIS3P2A8K0S8 358 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 RNF212BA8MTL3 300 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 ZNF587BE7ETH6 402 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 PRICKLE3O43900 615 aaPredicted RBP8.42□□□□□ -1.06
YBX3-208ENST00000540447 C22orf31O95567 290 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms