RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 RASAL1O95294 804 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 HPP00738 406 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 UROSP10746 265 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 FOSL1P15407 271 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 MAGP20916 626 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 HK2P52789 917 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 CASP6P55212 293 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 OCRLQ01968 901 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 MEF2AQ02078 507 aaPredicted RBP11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 FOXD4Q12950 439 aaPredicted RBP11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 DDX39BQ13838 428 aaKnown RBP11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 TBCCQ15814 346 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 GGTA1PQ4G0N0 100 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 CLEC6AQ6EIG7 209 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 LETMD1Q6P1Q0 360 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 FIGLAQ6QHK4 219 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 SLCO4C1Q6ZQN7 724 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 SHISA6Q6ZSJ9 500 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 DDIASQ8IXT1 998 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 LRRC34Q8IZ02 419 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 PIWIL2Q8TC59 973 aaKnown RBP11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 ZUFSPQ96AP4 578 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 FAR2Q96K12 515 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 SORT1Q99523 831 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 PLCD4Q9BRC7 762 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 ZNF395Q9H8N7 513 aaPredicted RBP11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 ZNF160Q9HCG1 818 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 KLHL20Q9Y2M5 609 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 TRAF6Q9Y4K3 522 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 PCDHGA11Q9Y5H2 935 aa11.75□□□□□ -0.53
CLSTN3-208ENST00000538933 ANKDD1BA6NHY2 528 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 UBFD1O14562 309 aaKnown RBP11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 ADAM10O14672 748 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 OR1F1O43749 312 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 F10P00742 488 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 PRR35P0CG20 571 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 EPORP19235 508 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 ALAS2P22557 587 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 GRIA3P42263 894 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 YBX1P67809 324 aaKnown RBP11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 REEP5Q00765 189 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 PMP22Q01453 160 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 PDCD2Q16342 344 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 IMPG1Q17R60 797 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 SGO1Q5FBB7 561 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 CES4AQ5XG92 561 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 SPPL2CQ8IUH8 684 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 KBTBD2Q8IY47 623 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 L3MBTL4Q8NA19 623 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 CHDHQ8NE62 594 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 ABHD11Q8NFV4 315 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 BRIX1Q8TDN6 353 aaKnown RBP11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 THAP3Q8WTV1 239 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 SELENOMQ8WWX9 145 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 RERGQ96A58 199 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 KCNA7Q96RP8 456 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 C20orf27Q9GZN8 174 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 PITHD1Q9GZP4 211 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 SOX17Q9H6I2 414 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 PNPOQ9NVS9 261 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 IRAK4Q9NWZ3 460 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 PTGFRNQ9P2B2 879 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 CTSFQ9UBX1 484 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 VTI1BQ9UEU0 232 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 ZDHHC2Q9UIJ5 367 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 TIMM22Q9Y584 194 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 SCN2AQ99250 2005 aa11.74□□□□□ -0.53
CLSTN3-208ENST00000538933 A0A1B0GX78 115 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 TRBC2A0A5B9 178 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 FEZF1A0PJY2 475 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 TRPC5OSA6NMA1 111 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 HAT1O14929 419 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 ULK1O75385 1050 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 WFS1O76024 890 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 WDPCPO95876 746 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 SERPIND1P05546 499 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 EZRP15311 586 aaKnown RBP11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 SERPINB3P29508 390 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 ARRB2P32121 409 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 CASP2P42575 452 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 SEC24CP53992 1094 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 RPS15AP62244 130 aaKnown RBP11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 LTBQ06643 244 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 ZC3H12BQ5HYM0 836 aaKnown RBP11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 KANK2Q63ZY3 851 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 FRG2Q64ET8 278 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 TMIGD1Q6UXZ0 262 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 TTLL10Q6ZVT0 673 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 CHERPQ8IWX8 916 aaKnown RBP11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 AMER2Q8N7J2 671 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 TTLQ8NG68 377 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 PHF10Q8WUB8 498 aaKnown RBP11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 TWIST2Q8WVJ9 160 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 WDR34Q96EX3 536 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 THOC1Q96FV9 657 aaKnown RBP11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 PPP1R36Q96LQ0 422 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 FRG2BQ96QU4 278 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 DMRTA2Q96SC8 542 aa11.73□□□□□ -0.53
CLSTN3-208ENST00000538933 RNF32Q9H0A6 362 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms