RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 SMURF2Q9HAU4 748 aa19.34■□□□□ 0.69
DDX55-205ENST00000538744 VNN3Q9NY84 501 aa19.34■□□□□ 0.69
DDX55-205ENST00000538744 H3BNH8 94 aa19.33■□□□□ 0.68
DDX55-205ENST00000538744 AXIN1O15169 862 aa19.33■□□□□ 0.68
DDX55-205ENST00000538744 CLPTM1O96005 669 aa19.33■□□□□ 0.68
DDX55-205ENST00000538744 IFNA14P01570 189 aa19.33■□□□□ 0.68
DDX55-205ENST00000538744 JUNDP17535 347 aa19.33■□□□□ 0.68
DDX55-205ENST00000538744 NELFEP18615 380 aaKnown RBP19.33■□□□□ 0.68
DDX55-205ENST00000538744 ARHGDIAP52565 204 aa19.33■□□□□ 0.68
DDX55-205ENST00000538744 ITGA1P56199 1179 aa19.33■□□□□ 0.68
DDX55-205ENST00000538744 RELAQ04206 551 aa19.33■□□□□ 0.68
DDX55-205ENST00000538744 PPP1R8Q12972 351 aaKnown RBP19.33■□□□□ 0.68
DDX55-205ENST00000538744 C1orf61Q13536 156 aa19.33■□□□□ 0.68
DDX55-205ENST00000538744 PUS10Q3MIT2 529 aaKnown RBP19.33■□□□□ 0.68
DDX55-205ENST00000538744 CRB2Q5IJ48 1285 aa19.33■□□□□ 0.68
DDX55-205ENST00000538744 RNF220Q5VTB9 566 aa19.33■□□□□ 0.68
DDX55-205ENST00000538744 TMEM26Q6ZUK4 368 aa19.33■□□□□ 0.68
DDX55-205ENST00000538744 USP51Q70EK9 711 aa19.33■□□□□ 0.68
DDX55-205ENST00000538744 C6orf120Q7Z4R8 191 aa19.33■□□□□ 0.68
DDX55-205ENST00000538744 PATL1Q86TB9 770 aaKnown RBP19.33■□□□□ 0.68
DDX55-205ENST00000538744 PJA1Q8NG27 643 aa19.33■□□□□ 0.68
DDX55-205ENST00000538744 LZICQ8WZA0 190 aa19.33■□□□□ 0.68
DDX55-205ENST00000538744 OR2A5Q96R48 311 aa19.33■□□□□ 0.68
DDX55-205ENST00000538744 ROGDIQ9GZN7 287 aa19.33■□□□□ 0.68
DDX55-205ENST00000538744 GABARAPL1Q9H0R8 117 aa19.33■□□□□ 0.68
DDX55-205ENST00000538744 CHRDQ9H2X0 955 aa19.33■□□□□ 0.68
DDX55-205ENST00000538744 U3KQV3 271 aa19.33■□□□□ 0.68
DDX55-205ENST00000538744 MYOCOSA0A1B0GUC4 107 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 METTL12A8MUP2 240 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 TMEM229AB2RXF0 380 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 SH3BP5O60239 455 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 DPM1O60762 260 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 CTSVO60911 334 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 PRKRAO75569 313 aaKnown RBP19.32■□□□□ 0.68
DDX55-205ENST00000538744 ZNF888P0CJ79 500 aaPredicted RBP19.32■□□□□ 0.68
DDX55-205ENST00000538744 FOSL2P15408 326 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 GPC1P35052 558 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 CCT3P49368 545 aaKnown RBP19.32■□□□□ 0.68
DDX55-205ENST00000538744 NCBP2P52298 156 aaKnown RBP eCLIP19.32■□□□□ 0.683e-7■□□□□ 10.4
DDX55-205ENST00000538744 BTN3A2P78410 334 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 APOFQ13790 326 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 ZIK1Q3SY52 487 aaPredicted RBP19.32■□□□□ 0.68
DDX55-205ENST00000538744 SFTPA2Q8IWL1 248 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 GJD3Q8N144 294 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 HORMAD2Q8N7B1 307 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 FAM46DQ8NEK8 389 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 UTP15Q8TED0 518 aaKnown RBP19.32■□□□□ 0.68
DDX55-205ENST00000538744 ZDHHC1Q8WTX9 485 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 TAMM41Q96BW9 452 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 C7orf34Q96L11 122 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 LRRC61Q9BV99 259 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 A4GALTQ9NPC4 353 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 HRASLS2Q9NWW9 162 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 PILRAQ9UKJ1 303 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 ENTPD4Q9Y227 616 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 PADI2Q9Y2J8 665 aa19.32■□□□□ 0.68
DDX55-205ENST00000538744 A0A0J9YVX5 310 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 A0A0J9YY10 115 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 URADA6NGE7 173 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 GLOD5A6NK44 160 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 MYO1GB0I1T2 1018 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 PROM1O43490 865 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 PGM3O95394 542 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 CD38P28907 300 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 DNAJA1P31689 397 aaKnown RBP19.31■□□□□ 0.68
DDX55-205ENST00000538744 PXNP49023 591 aaPredicted RBP19.31■□□□□ 0.68
DDX55-205ENST00000538744 PCBP3P57721 371 aaKnown RBP19.31■□□□□ 0.68
DDX55-205ENST00000538744 HHEXQ03014 270 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 IFI44LQ53G44 452 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 SLC48A1Q6P1K1 146 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 TTC33Q6PID6 262 aaPredicted RBP19.31■□□□□ 0.68
DDX55-205ENST00000538744 CADM4Q8NFZ8 388 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 TRAPPC9Q96Q05 1148 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 ZFYVE21Q9BQ24 234 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 TOR3AQ9H497 397 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 CXorf56Q9H5V9 222 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 SOX17Q9H6I2 414 aaPredicted RBP19.31■□□□□ 0.68
DDX55-205ENST00000538744 CLK4Q9HAZ1 481 aaKnown RBP19.31■□□□□ 0.68
DDX55-205ENST00000538744 ORC6Q9Y5N6 252 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 TDRD6O60522 2096 aaKnown RBP19.31■□□□□ 0.68
DDX55-205ENST00000538744 M0QX08 132 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 PGRMC2O15173 223 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 MAP3K13O43283 966 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 HS6ST1O60243 411 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 ERAL1O75616 437 aaKnown RBP19.31■□□□□ 0.68
DDX55-205ENST00000538744 DIRAS1O95057 198 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 CLIC3O95833 236 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 OPN1SWP03999 348 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 FPR1P21462 350 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 RPS26P62854 115 aaKnown RBP19.31■□□□□ 0.68
DDX55-205ENST00000538744 TP53BP2Q13625 1128 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 SUZ12Q15022 739 aaKnown RBP19.31■□□□□ 0.68
DDX55-205ENST00000538744 RFX4Q33E94 735 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 LIN52Q52LA3 116 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 TTC23Q5W5X9 447 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 C18orf63Q68DL7 685 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 REEP3Q6NUK4 255 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 TNFAIP8L2Q6P589 184 aaPredicted RBP19.31■□□□□ 0.68
DDX55-205ENST00000538744 OOSP2Q86WS3 158 aa19.31■□□□□ 0.68
DDX55-205ENST00000538744 OFCC1Q8IZS5 231 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms