RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 AMFRQ9UKV5 643 aa10.23□□□□□ -0.77
CLPB-208ENST00000538021 SOX13Q9UN79 622 aa10.23□□□□□ -0.77
CLPB-208ENST00000538021 MRPS33Q9Y291 106 aaKnown RBP10.23□□□□□ -0.77
CLPB-208ENST00000538021 FREM3P0C091 2139 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 PABPN1LA6NDY0 278 aaKnown RBP10.22□□□□□ -0.77
CLPB-208ENST00000538021 MBD3L3A6NE82 208 aaPredicted RBP10.22□□□□□ -0.77
CLPB-208ENST00000538021 CD8B2A6NJW9 211 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 LRATO95237 230 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 F12P00748 615 aaPredicted RBP10.22□□□□□ -0.77
CLPB-208ENST00000538021 PTH2RP49190 550 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 FOXF2Q12947 444 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 THOC5Q13769 683 aaKnown RBP10.22□□□□□ -0.77
CLPB-208ENST00000538021 ZNF791Q3KP31 576 aaPredicted RBP10.22□□□□□ -0.77
CLPB-208ENST00000538021 BBS9Q3SYG4 887 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 PIGGQ5H8A4 983 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 DUPD1Q68J44 220 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 CASC4Q6P4E1 433 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 SYDE1Q6ZW31 735 aaPredicted RBP10.22□□□□□ -0.77
CLPB-208ENST00000538021 PEX26Q7Z412 305 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 ZNF595Q8IYB9 648 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 C9orf106Q8NAJ2 232 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 MAPK1IP1LQ8NDC0 245 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 FAM13CQ8NE31 585 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 MBD3L2Q8NHZ7 208 aaPredicted RBP10.22□□□□□ -0.77
CLPB-208ENST00000538021 PPP1R14CQ8TAE6 165 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 PAQR8Q8TEZ7 354 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 EEF1AKMT1Q8WVE0 214 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 C1orf54Q8WWF1 131 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 NEIL2Q969S2 332 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 AIF1LQ9BQI0 150 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 ALOXE3Q9BYJ1 711 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 PRDM14Q9GZV8 571 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 AICDAQ9GZX7 198 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 EIF2B3Q9NR50 452 aaKnown RBP10.22□□□□□ -0.77
CLPB-208ENST00000538021 ARL15Q9NXU5 204 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 COPS7AQ9UBW8 275 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 TRMT6Q9UJA5 497 aaKnown RBP10.22□□□□□ -0.77
CLPB-208ENST00000538021 SLC6A5Q9Y345 797 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 NINQ8N4C6 2090 aa10.22□□□□□ -0.77
CLPB-208ENST00000538021 DSCAMO60469 2012 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 GRID2IPA4D2P6 1211 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 EIF3FO00303 357 aaPredicted RBP10.21□□□□□ -0.77
CLPB-208ENST00000538021 SIAH2O43255 324 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 ERI3O43414 337 aaKnown RBP10.21□□□□□ -0.77
CLPB-208ENST00000538021 B3GALT2O43825 422 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 ACSL3O95573 720 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 SERPINA6P08185 405 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 CYLC1P35663 651 aaPredicted RBP10.21□□□□□ -0.77
CLPB-208ENST00000538021 CPOXP36551 454 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 RGS4P49798 205 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 NR1H2P55055 460 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 STXBP1P61764 594 aaKnown RBP10.21□□□□□ -0.77
CLPB-208ENST00000538021 REEP5Q00765 189 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 KRTAP1-1Q07627 177 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 DHX9Q08211 1270 aaKnown RBP10.21□□□□□ -0.77
CLPB-208ENST00000538021 TBL3Q12788 808 aaKnown RBP10.21□□□□□ -0.77
CLPB-208ENST00000538021 SP140Q13342 867 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 TOMM20Q15388 145 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 MPEG1Q2M385 716 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 HEPHL1Q6MZM0 1159 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 LRRC8EQ6NSJ5 796 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 C20orf204Q6ZNR8 217 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 TMPRSS11BQ86T26 416 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 MYO1HQ8N1T3 1032 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 LRRC57Q8N9N7 239 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 OR10G3Q8NGC4 313 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 OR56A3Q8NH54 315 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 GABPB2Q8TAK5 448 aaPredicted RBP10.21□□□□□ -0.77
CLPB-208ENST00000538021 SLC22A8Q8TCC7 542 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 CCT6BQ92526 530 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 SPACA9Q96E40 222 aaPredicted RBP10.21□□□□□ -0.77
CLPB-208ENST00000538021 CSF3RQ99062 836 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 NPLQ9BXD5 320 aaPredicted RBP10.21□□□□□ -0.77
CLPB-208ENST00000538021 GSX2Q9BZM3 304 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 TSGA10Q9BZW7 698 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 CALHM2Q9HA72 323 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 PROK2Q9HC23 129 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 SH2D2AQ9NP31 389 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 CNIH4Q9P003 139 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 VTI1BQ9UEU0 232 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 DYRK1BQ9Y463 629 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 TESMINQ9Y4I5 508 aa10.21□□□□□ -0.77
CLPB-208ENST00000538021 SYNDIG1LA6NDD5 238 aa10.2□□□□□ -0.78
CLPB-208ENST00000538021 DEFB108AA8MXU0 73 aa10.2□□□□□ -0.78
CLPB-208ENST00000538021 SNPHO15079 494 aa10.2□□□□□ -0.78
CLPB-208ENST00000538021 PHF1O43189 567 aaPredicted RBP10.2□□□□□ -0.78
CLPB-208ENST00000538021 CTIFO43310 598 aaKnown RBP10.2□□□□□ -0.78
CLPB-208ENST00000538021 CTNSO60931 367 aa10.2□□□□□ -0.78
CLPB-208ENST00000538021 GUCA1CO95843 209 aa10.2□□□□□ -0.78
CLPB-208ENST00000538021 C1QAP02745 245 aa10.2□□□□□ -0.78
CLPB-208ENST00000538021 TP53P04637 393 aaPredicted RBP10.2□□□□□ -0.78
CLPB-208ENST00000538021 TERF1P54274 439 aa10.2□□□□□ -0.78
CLPB-208ENST00000538021 TNK1Q13470 666 aa10.2□□□□□ -0.78
CLPB-208ENST00000538021 DHX34Q14147 1143 aaKnown RBP10.2□□□□□ -0.78
CLPB-208ENST00000538021 RCAN2Q14206 197 aa10.2□□□□□ -0.78
CLPB-208ENST00000538021 VASNQ6EMK4 673 aa10.2□□□□□ -0.78
CLPB-208ENST00000538021 UGT3A1Q6NUS8 523 aa10.2□□□□□ -0.78
CLPB-208ENST00000538021 ZNF441Q8N8Z8 693 aa10.2□□□□□ -0.78
CLPB-208ENST00000538021 GAL3ST3Q96A11 431 aa10.2□□□□□ -0.78
CLPB-208ENST00000538021 WDYHV1Q96HA8 205 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms