RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 SFSWAPQ12872 951 aaKnown RBP16.57■□□□□ 0.24
SNX17-210ENST00000537606 SPDYE7PQ495Y7 208 aa16.57■□□□□ 0.24
SNX17-210ENST00000537606 ZNF691Q5VV52 312 aa16.57■□□□□ 0.24
SNX17-210ENST00000537606 TSEN54Q7Z6J9 526 aaKnown RBP16.57■□□□□ 0.24
SNX17-210ENST00000537606 ERI1Q8IV48 349 aaKnown RBP16.57■□□□□ 0.24
SNX17-210ENST00000537606 FAM160A2Q8N612 972 aaPredicted RBP16.57■□□□□ 0.24
SNX17-210ENST00000537606 BPIFB6Q8NFQ5 453 aa16.57■□□□□ 0.24
SNX17-210ENST00000537606 OR5P2Q8WZ92 322 aa16.57■□□□□ 0.24
SNX17-210ENST00000537606 SH3GL3Q99963 347 aa16.57■□□□□ 0.24
SNX17-210ENST00000537606 EPS8L2Q9H6S3 715 aa16.57■□□□□ 0.24
SNX17-210ENST00000537606 PRDM7Q9NQW5 492 aa16.57■□□□□ 0.24
SNX17-210ENST00000537606 APOBEC3BQ9UH17 382 aaKnown RBP16.57■□□□□ 0.24
SNX17-210ENST00000537606 ATG4BQ9Y4P1 393 aa16.57■□□□□ 0.24
SNX17-210ENST00000537606 ORC6Q9Y5N6 252 aa16.57■□□□□ 0.24
SNX17-210ENST00000537606 FANCMQ8IYD8 2048 aa16.57■□□□□ 0.24
SNX17-210ENST00000537606 PGRMC2O15173 223 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 MBTPS2O43462 519 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 XPNPEP2O43895 674 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 SH3BP5O60239 455 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 ERAL1O75616 437 aaKnown RBP16.56■□□□□ 0.24
SNX17-210ENST00000537606 CELA2BP08218 269 aaPredicted RBP16.56■□□□□ 0.24
SNX17-210ENST00000537606 MATN1P21941 496 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 CERS1P27544 350 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 ARHGDIAP52565 204 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 RAD23AP54725 363 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 IL5RAQ01344 420 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 EPS8Q12929 822 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 FADDQ13158 208 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 SKIV2LQ15477 1246 aaKnown RBP16.56■□□□□ 0.24
SNX17-210ENST00000537606 RPS26P11Q5JNZ5 115 aaPredicted RBP16.56■□□□□ 0.24
SNX17-210ENST00000537606 TJAP1Q5JTD0 557 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 XAF1Q6GPH4 301 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 ACOT4Q8N9L9 421 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 KCT2Q8NC54 265 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 PIK3C3Q8NEB9 887 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 TTLQ8NG68 377 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 POP5Q969H6 163 aaKnown RBP16.56■□□□□ 0.24
SNX17-210ENST00000537606 SIRT3Q9NTG7 399 aaPredicted RBP16.56■□□□□ 0.24
SNX17-210ENST00000537606 PAK1IP1Q9NWT1 392 aaPredicted RBP16.56■□□□□ 0.24
SNX17-210ENST00000537606 THUMPD1Q9NXG2 353 aaKnown RBP16.56■□□□□ 0.24
SNX17-210ENST00000537606 OR6C2Q9NZP2 312 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 KLF15Q9UIH9 416 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 RAB23Q9ULC3 237 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 PCDHGA4Q9Y5G9 962 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 AP1M2Q9Y6Q5 423 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 LAMA1P25391 3075 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 A0A1W2PS29 197 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 PRAMEF25A6NGN4 478 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 C8orf89P0DMQ9 161 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 F3P13726 295 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 POLR2CP19387 275 aaPredicted RBP16.56■□□□□ 0.24
SNX17-210ENST00000537606 DNAJA1P31689 397 aaKnown RBP16.56■□□□□ 0.24
SNX17-210ENST00000537606 CLK3P49761 638 aaKnown RBP16.56■□□□□ 0.24
SNX17-210ENST00000537606 DSTNP60981 165 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 TP53BP2Q13625 1128 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 SLC9A5Q14940 896 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 BROXQ5VW32 411 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 C18orf63Q68DL7 685 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 ZNF425Q6IV72 752 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 ABHD17CQ6PCB6 329 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 HDAC2Q92769 488 aaKnown RBP16.56■□□□□ 0.24
SNX17-210ENST00000537606 OTUB1Q96FW1 271 aaPredicted RBP16.56■□□□□ 0.24
SNX17-210ENST00000537606 GPR174Q9BXC1 333 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 TMEM38AQ9H6F2 299 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 REEP1Q9H902 201 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 TESMINQ9Y4I5 508 aa16.56■□□□□ 0.24
SNX17-210ENST00000537606 TDRD6O60522 2096 aaKnown RBP16.55■□□□□ 0.24
SNX17-210ENST00000537606 CCDC88CQ9P219 2028 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 VCANP13611 3396 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 A0A1W2PR48 441 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 A6NCN8 305 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 H3BMQ9 156 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 FOXD2O60548 495 aaPredicted RBP16.55■□□□□ 0.24
SNX17-210ENST00000537606 PRAMEF10O60809 474 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 MAGP20916 626 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 FPR1P21462 350 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 HIST1H1TP22492 207 aaPredicted RBP16.55■□□□□ 0.24
SNX17-210ENST00000537606 RRM2P31350 389 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 RBM48Q5RL73 367 aaKnown RBP16.55■□□□□ 0.24
SNX17-210ENST00000537606 KDM4DQ6B0I6 523 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 LAIR1Q6GTX8 287 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 C6orf120Q7Z4R8 191 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 SPARTQ8N0X7 666 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 OR52J3Q8NH60 311 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 COG8Q96MW5 612 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 ADAM29Q9UKF5 820 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 SH3GLB1Q9Y371 365 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 GSAPA4D1B5 854 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 SLC16A6O15403 523 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 ZW10O43264 779 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 CDK4P11802 303 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 HOXB6P17509 224 aaKnown RBP16.55■□□□□ 0.24
SNX17-210ENST00000537606 FMO3P31513 532 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 GPR18Q14330 331 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 TMEM35AQ53FP2 167 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 ATG16L2Q8NAA4 619 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 UBE2FQ969M7 185 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 ZBED6CLQ96FA7 236 aaPredicted RBP16.55■□□□□ 0.24
SNX17-210ENST00000537606 LHPPQ9H008 270 aa16.55■□□□□ 0.24
SNX17-210ENST00000537606 GLIPR2Q9H4G4 154 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms