RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 DCDC2Q9UHG0 476 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 ZNF225Q9UK10 706 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 FBXW2Q9UKT8 454 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 ASB4Q9Y574 426 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 PPP6CO00743 305 aa16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 DLX3O60479 287 aa16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 LDB3O75112 727 aa16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 EEDO75530 441 aaKnown RBP16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 RASAL1O95294 804 aa16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 SHBGP04278 402 aa16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 PYGBP11216 843 aa16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 ATP5F1P24539 256 aaPredicted RBP16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 HSD17B3P37058 310 aa16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 HNRNPH2P55795 449 aaKnown RBP16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 TNFRSF17Q02223 184 aa16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 STX4Q12846 297 aa16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 OR1C1Q15619 314 aa16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 ZNF678Q5SXM1 525 aa16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 LETMD1Q6P1Q0 360 aa16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 RPS27LQ71UM5 84 aaKnown RBP16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 ZNF227Q86WZ6 799 aa16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 HORMAD2Q8N7B1 307 aa16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 OR14A16Q8NHC5 309 aa16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 NCLNQ969V3 563 aa16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 PSMG3-AS1Q96PY0 264 aa16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 RPF2Q9H7B2 306 aaKnown RBP16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 LYARQ9NX58 379 aaKnown RBP16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 TBK1Q9UHD2 729 aa16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 ATG4BQ9Y4P1 393 aa16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 CLCA3PQ9Y6N3 262 aa16.03■□□□□ 0.16
SFSWAP-205ENST00000537164 TRBV11-1A0A0K0K1C0 115 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 ASPDHA6ND91 283 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 WIPF3A6NGB9 483 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 TMEM200CA6NKL6 621 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 TMPRSS11DO60235 418 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 FGF17O60258 216 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 ZNF500O60304 480 aaPredicted RBP16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 SEMA7AO75326 666 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 CRYABP02511 175 aaKnown RBP16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 IMPDH1P20839 514 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 TLX1P31314 330 aaPredicted RBP16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 BUD31P41223 144 aaPredicted RBP16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 PRKAA2P54646 552 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 CDH13P55290 713 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 CLCQ05315 142 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 IFT88Q13099 833 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 ELOAQ14241 798 aaKnown RBP16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 UNC50Q53HI1 259 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 ZNF468Q5VIY5 522 aaPredicted RBP16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 SPINK14Q6IE38 97 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 NUDT13Q86X67 352 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 SLC22A9Q8IVM8 553 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 TMEM178AQ8NBL3 297 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 OR8K3Q8NH51 312 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 PRR7Q8TB68 274 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 UBLCP1Q8WVY7 318 aaPredicted RBP16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 L3HYPDHQ96EM0 354 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 TMEM237Q96Q45 408 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 BRF2Q9HAW0 419 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 LRFN1Q9P244 771 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 TRPS1Q9UHF7 1281 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 ADAM29Q9UKF5 820 aa16.02■□□□□ 0.16
SFSWAP-205ENST00000537164 A0A1W2PPM1 405 aa16.01■□□□□ 0.15
SFSWAP-205ENST00000537164 GOLGA8RI6L899 631 aa16.01■□□□□ 0.15
SFSWAP-205ENST00000537164 FCHO1O14526 889 aa16.01■□□□□ 0.15
SFSWAP-205ENST00000537164 ZFAND5O76080 213 aa16.01■□□□□ 0.15
SFSWAP-205ENST00000537164 DDAH2O95865 285 aa16.01■□□□□ 0.15
SFSWAP-205ENST00000537164 IFNA16P05015 189 aa16.01■□□□□ 0.15
SFSWAP-205ENST00000537164 SP1P08047 785 aa16.01■□□□□ 0.15
SFSWAP-205ENST00000537164 FAM58BPP0C7Q3 252 aa16.01■□□□□ 0.15
SFSWAP-205ENST00000537164 CD46P15529 392 aa16.01■□□□□ 0.15
SFSWAP-205ENST00000537164 ARL1P40616 181 aaPredicted RBP16.01■□□□□ 0.15
SFSWAP-205ENST00000537164 STT3AP46977 705 aa16.01■□□□□ 0.15
SFSWAP-205ENST00000537164 CYB561P49447 251 aa16.01■□□□□ 0.15
SFSWAP-205ENST00000537164 HLCSP50747 726 aa16.01■□□□□ 0.15
SFSWAP-205ENST00000537164 C18orf63Q68DL7 685 aa16.01■□□□□ 0.15
SFSWAP-205ENST00000537164 MTFMTQ96DP5 389 aaKnown RBP16.01■□□□□ 0.15
SFSWAP-205ENST00000537164 ZNF382Q96SR6 550 aa16.01■□□□□ 0.15
SFSWAP-205ENST00000537164 ELOVL6Q9H5J4 265 aa16.01■□□□□ 0.15
SFSWAP-205ENST00000537164 PRM3Q9NNZ6 103 aa16.01■□□□□ 0.15
SFSWAP-205ENST00000537164 ANKRD10Q9NXR5 420 aa16.01■□□□□ 0.15
SFSWAP-205ENST00000537164 EMCNQ9ULC0 261 aa16.01■□□□□ 0.15
SFSWAP-205ENST00000537164 SNX6Q9UNH7 406 aa16.01■□□□□ 0.15
SFSWAP-205ENST00000537164 ICE1Q9Y2F5 2266 aa16■□□□□ 0.15
SFSWAP-205ENST00000537164 A0A1W2PR48 441 aa16■□□□□ 0.15
SFSWAP-205ENST00000537164 C17orf105B2RV13 164 aa16■□□□□ 0.15
SFSWAP-205ENST00000537164 PRKNO60260 465 aaPredicted RBP16■□□□□ 0.15
SFSWAP-205ENST00000537164 CDH16O75309 829 aa16■□□□□ 0.15
SFSWAP-205ENST00000537164 GLRA3O75311 464 aa16■□□□□ 0.15
SFSWAP-205ENST00000537164 SUPT7LO94864 414 aa16■□□□□ 0.15
SFSWAP-205ENST00000537164 AGFG2O95081 481 aa16■□□□□ 0.15
SFSWAP-205ENST00000537164 OC90Q02509 493 aaPredicted RBP16■□□□□ 0.15
SFSWAP-205ENST00000537164 FOLH1Q04609 750 aa16■□□□□ 0.15
SFSWAP-205ENST00000537164 TTC19Q6DKK2 380 aaPredicted RBP16■□□□□ 0.15
SFSWAP-205ENST00000537164 SLC25A25Q6KCM7 469 aa16■□□□□ 0.15
SFSWAP-205ENST00000537164 CYP20A1Q6UW02 462 aa16■□□□□ 0.15
SFSWAP-205ENST00000537164 ST13P4Q8IZP2 240 aaPredicted RBP16■□□□□ 0.15
SFSWAP-205ENST00000537164 METTL4Q8N3J2 472 aa16■□□□□ 0.15
SFSWAP-205ENST00000537164 SLC2A12Q8TD20 617 aa16■□□□□ 0.15
SFSWAP-205ENST00000537164 TRPC4APQ8TEL6 797 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms