RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 CEP112Q8N8E3 955 aa13.91□□□□□ -0.18
UBC-204ENST00000536661 ZNF321PQ8N8H1 164 aa13.91□□□□□ -0.18
UBC-204ENST00000536661 L3MBTL4Q8NA19 623 aa13.91□□□□□ -0.18
UBC-204ENST00000536661 MORN4Q8NDC4 146 aa13.91□□□□□ -0.18
UBC-204ENST00000536661 OR52B6Q8NGF0 335 aa13.91□□□□□ -0.18
UBC-204ENST00000536661 OR14A16Q8NHC5 309 aa13.91□□□□□ -0.18
UBC-204ENST00000536661 WDR20Q8TBZ3 569 aa13.91□□□□□ -0.18
UBC-204ENST00000536661 PTPMT1Q8WUK0 201 aaPredicted RBP13.91□□□□□ -0.18
UBC-204ENST00000536661 SREK1Q8WXA9 508 aaKnown RBP13.91□□□□□ -0.18
UBC-204ENST00000536661 DAZLQ92904 295 aaKnown RBP13.91□□□□□ -0.18
UBC-204ENST00000536661 TMEM125Q96AQ2 219 aa13.91□□□□□ -0.18
UBC-204ENST00000536661 REPS1Q96D71 796 aa13.91□□□□□ -0.18
UBC-204ENST00000536661 NSUN5Q96P11 429 aaKnown RBP13.91□□□□□ -0.18
UBC-204ENST00000536661 CDK15Q96Q40 435 aa13.91□□□□□ -0.18
UBC-204ENST00000536661 CCDC77Q9BR77 488 aa13.91□□□□□ -0.18
UBC-204ENST00000536661 ZNF717Q9BY31 904 aaPredicted RBP13.91□□□□□ -0.18
UBC-204ENST00000536661 NOL11Q9H8H0 719 aaKnown RBP13.91□□□□□ -0.18
UBC-204ENST00000536661 LIN28AQ9H9Z2 209 aaKnown RBP13.91□□□□□ -0.18
UBC-204ENST00000536661 PCTPQ9UKL6 214 aa13.91□□□□□ -0.18
UBC-204ENST00000536661 TMCO1Q9UM00 188 aa13.91□□□□□ -0.18
UBC-204ENST00000536661 EXOC1LA0A1B0GW35 172 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 C17orf105B2RV13 164 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 NPIPA5E9PKD4 350 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 FGF17O60258 216 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 EEDO75530 441 aaKnown RBP13.9□□□□□ -0.18
UBC-204ENST00000536661 PRKRAO75569 313 aaKnown RBP13.9□□□□□ -0.18
UBC-204ENST00000536661 ABHD2P08910 425 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 COL6A2P12110 1019 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 GCAP28676 217 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 ARL1P40616 181 aaPredicted RBP13.9□□□□□ -0.18
UBC-204ENST00000536661 CA7P43166 264 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 NEK2P51955 445 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 IGLV3-21P80748 117 aaPredicted RBP13.9□□□□□ -0.18
UBC-204ENST00000536661 RBPJQ06330 500 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 TRAF3Q13114 568 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 RNFT1Q5M7Z0 435 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 C18orf63Q68DL7 685 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 ZNF787Q6DD87 383 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 SIAH3Q8IW03 269 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 OR4N5Q8IXE1 308 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 CYP4Z2PQ8N1L4 340 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 ZCCHC7Q8N3Z6 543 aaKnown RBP13.9□□□□□ -0.18
UBC-204ENST00000536661 TMEM156Q8N614 296 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 SLC2A12Q8TD20 617 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 CENPKQ9BS16 269 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 OR8D2Q9GZM6 311 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 ZBTB26Q9HCK0 441 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 PHF11Q9UIL8 331 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 SH3BGRL2Q9UJC5 107 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 NPIPA1Q9UND3 350 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 KLF13Q9Y2Y9 288 aaPredicted RBP13.9□□□□□ -0.18
UBC-204ENST00000536661 ATG4BQ9Y4P1 393 aa13.9□□□□□ -0.18
UBC-204ENST00000536661 NCOA6Q14686 2063 aaPredicted RBP13.9□□□□□ -0.18
UBC-204ENST00000536661 A0A0A6YYD5 115 aa13.89□□□□□ -0.19
UBC-204ENST00000536661 TMPRSS11DO60235 418 aa13.89□□□□□ -0.19
UBC-204ENST00000536661 SLC19A2O60779 497 aa13.89□□□□□ -0.19
UBC-204ENST00000536661 SMIM24O75264 130 aa13.89□□□□□ -0.19
UBC-204ENST00000536661 OR2J2O76002 312 aa13.89□□□□□ -0.19
UBC-204ENST00000536661 CLDN9O95484 217 aa13.89□□□□□ -0.19
UBC-204ENST00000536661 MLYCDO95822 493 aa13.89□□□□□ -0.19
UBC-204ENST00000536661 SBK3P0C264 359 aa13.89□□□□□ -0.19
UBC-204ENST00000536661 ZNF24P17028 368 aa13.89□□□□□ -0.19
UBC-204ENST00000536661 TNNI3P19429 210 aa13.89□□□□□ -0.19
UBC-204ENST00000536661 PTX3P26022 381 aaPredicted RBP13.89□□□□□ -0.19
UBC-204ENST00000536661 BSGP35613 385 aa13.89□□□□□ -0.19
UBC-204ENST00000536661 MEOX1P50221 254 aa13.89□□□□□ -0.19
UBC-204ENST00000536661 SSR4P51571 173 aa13.89□□□□□ -0.19
UBC-204ENST00000536661 CCNG1P51959 295 aa13.89□□□□□ -0.19
UBC-204ENST00000536661 ARFIP1P53367 373 aa13.89□□□□□ -0.19
UBC-204ENST00000536661 CUL3Q13618 768 aa13.89□□□□□ -0.19
UBC-204ENST00000536661 HSDL2Q6YN16 418 aa13.89□□□□□ -0.19
UBC-204ENST00000536661 RPS27LQ71UM5 84 aaKnown RBP13.89□□□□□ -0.19
UBC-204ENST00000536661 GPR180Q86V85 440 aa13.89□□□□□ -0.19
UBC-204ENST00000536661 MRPL46Q9H2W6 279 aaKnown RBP13.89□□□□□ -0.19
UBC-204ENST00000536661 RPF2Q9H7B2 306 aaKnown RBP13.89□□□□□ -0.19
UBC-204ENST00000536661 MS4A12Q9NXJ0 267 aa13.89□□□□□ -0.19
UBC-204ENST00000536661 MYOTQ9UBF9 498 aa13.89□□□□□ -0.19
UBC-204ENST00000536661 YARS2Q9Y2Z4 477 aaKnown RBP13.89□□□□□ -0.19
UBC-204ENST00000536661 WWP2O00308 870 aa13.88□□□□□ -0.19
UBC-204ENST00000536661 FOXE1O00358 373 aaPredicted RBP13.88□□□□□ -0.19
UBC-204ENST00000536661 CCL21O00585 134 aa13.88□□□□□ -0.19
UBC-204ENST00000536661 RIPK2O43353 540 aa13.88□□□□□ -0.19
UBC-204ENST00000536661 RPS17P08708 135 aaKnown RBP13.88□□□□□ -0.19
UBC-204ENST00000536661 SNRPAP09012 282 aaKnown RBP13.88□□□□□ -0.19
UBC-204ENST00000536661 RHOXF2BP0C7M4 288 aa13.88□□□□□ -0.19
UBC-204ENST00000536661 DCTP40126 519 aa13.88□□□□□ -0.19
UBC-204ENST00000536661 STT3AP46977 705 aa13.88□□□□□ -0.19
UBC-204ENST00000536661 HK2P52789 917 aa13.88□□□□□ -0.19
UBC-204ENST00000536661 GPR85P60893 370 aa13.88□□□□□ -0.19
UBC-204ENST00000536661 FOLH1Q04609 750 aa13.88□□□□□ -0.19
UBC-204ENST00000536661 C3AR1Q16581 482 aa13.88□□□□□ -0.19
UBC-204ENST00000536661 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.88□□□□□ -0.19
UBC-204ENST00000536661 KRTCAP3Q53RY4 240 aa13.88□□□□□ -0.19
UBC-204ENST00000536661 MRM1Q6IN84 353 aaKnown RBP13.88□□□□□ -0.19
UBC-204ENST00000536661 DGAT2L6Q6ZPD8 337 aa13.88□□□□□ -0.19
UBC-204ENST00000536661 TRMT10CQ7L0Y3 403 aaKnown RBP13.88□□□□□ -0.19
UBC-204ENST00000536661 MDGA2Q7Z553 956 aa13.88□□□□□ -0.19
UBC-204ENST00000536661 SULF2Q8IWU5 870 aa13.88□□□□□ -0.19
UBC-204ENST00000536661 IFT20Q8IY31 132 aa13.88□□□□□ -0.19
UBC-204ENST00000536661 TMEM151AQ8N4L1 468 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms